RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 NEK5Q6P3R8 708 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 DNAJC24Q6P3W2 148 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SCYL2Q6P3W7 929 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 CCNI2Q6ZMN8 369 aaPredicted RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 ERN2Q76MJ5 926 aaKnown RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 SLFN11Q7Z7L1 901 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 IQCHQ86VS3 1027 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 MCOLN2Q8IZK6 566 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 PCDH20Q8N6Y1 951 aaKnown RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 BAP1Q92560 729 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 KLK6Q92876 244 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 NTAN1Q96AB6 310 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 MCEEQ96PE7 176 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 HEPHQ9BQS7 1158 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SYT11Q9BT88 431 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 MAGEH1Q9H213 219 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 ERVMER34-1Q9H9K5 563 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 DYRK4Q9NR20 520 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 ZFR2Q9UPR6 939 aaKnown RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 CA5BQ9Y2D0 317 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 WASF2Q9Y6W5 498 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 PLXNA2O75051 1894 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 NBEAQ8NFP9 2946 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 CXorf51AA0A1B0GTR3 108 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 TMCO5BA8MYB1 307 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 CCP110O43303 1012 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 RAMP2O60895 175 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 CAPNS1P04632 268 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 ITGAVP06756 1048 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 PRLRP16471 622 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 L1CAMP32004 1257 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 ETFBP38117 255 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 RXRGP48443 463 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 ARRB1P49407 418 aaPredicted RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 CCNHP51946 323 aaPredicted RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 OVGP1Q12889 678 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 BNIP3Q12983 259 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 POLD3Q15054 466 aaPredicted RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 LEKR1Q6ZMV7 388 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 HORMAD1Q86X24 394 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 TMEM145Q8NBT3 493 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 ISG20Q96AZ6 181 aaKnown RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 PPP1R16AQ96I34 528 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 CNPY3Q9BT09 278 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 TM6SF2Q9BZW4 377 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 HECAQ9UBI9 543 aaPredicted RBP10.48□□□□□ -0.73
CLK3-205ENST00000561673 FZD10Q9ULW2 581 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 HPCAL4Q9UM19 191 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 MYO6Q9UM54 1294 aa10.48□□□□□ -0.73
CLK3-205ENST00000561673 ANKRD62A6NC57 917 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 LRRC53A6NM62 1247 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 YKT6O15498 198 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 KDELR3O43731 214 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 MAGEC1O60732 1142 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 PCDH8O95206 1070 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 ADRB3P13945 408 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 ITGB7P26010 798 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 EPHA8P29322 1005 aaPredicted RBP10.47□□□□□ -0.73
CLK3-205ENST00000561673 EPHB2P29323 1055 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 GKP32189 559 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 ZNF165P49910 485 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 OGDHQ02218 1023 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 MAMLD1Q13495 774 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 INAVAQ3KP66 663 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 FILIP1LQ4L180 1135 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 EFHC2Q5JST6 749 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 SEL1L3Q68CR1 1132 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 DCUN1D2Q6PH85 259 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 DNAAF5Q86Y56 855 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 MARCH9Q86YJ5 346 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 OXR1Q8N573 874 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 EID2Q8N6I1 236 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 RTL3Q8N8U3 475 aaKnown RBP10.47□□□□□ -0.73
CLK3-205ENST00000561673 OR6K2Q8NGY2 324 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 ZCCHC14Q8WYQ9 949 aaKnown RBP10.47□□□□□ -0.73
CLK3-205ENST00000561673 VOPP1Q96AW1 172 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 KLHDC7BQ96G42 594 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 MS4A3Q96HJ5 214 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 VCPIP1Q96JH7 1222 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 MYOCQ99972 504 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 FUCA2Q9BTY2 467 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 KLC2Q9H0B6 622 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 ZDHHC6Q9H6R6 413 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 FZD3Q9NPG1 666 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 PARVAQ9NVD7 372 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 AIPL1Q9NZN9 384 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 FTSJ1Q9UET6 329 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 FADS3Q9Y5Q0 445 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 IGF2RP11717 2491 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 CHD6Q8TD26 2715 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
CLK3-205ENST00000561673 NYNRINQ9P2P1 1898 aaKnown RBP10.47□□□□□ -0.73
CLK3-205ENST00000561673 A0A1B0GTH6 734 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms