RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 VRK3Q8IV63 474 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 DHX40Q8IX18 779 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 FTSJ3Q8IY81 847 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 CMTM8Q8IZV2 173 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 SRBD1Q8N5C6 995 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 ALLCQ8N6M5 410 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 CDYL2Q8N8U2 506 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 CCDC26Q8TAB7 109 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 HMGB4Q8WW32 186 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 USP13Q92995 863 aaPredicted RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 TMEM143Q96AN5 459 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 VOPP1Q96AW1 172 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 RRP36Q96EU6 259 aaKnown RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 SEMA3CQ99985 751 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 ZNF577Q9BSK1 485 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 UBAC1Q9BSL1 405 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.07□□□□□ -1.76
HERC1-211ENST00000560983 ZDHHC4Q9NPG8 344 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 PACSIN3Q9UKS6 424 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 PCDHB6Q9Y5E3 794 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 GON4LQ3T8J9 2241 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 CABIN1Q9Y6J0 2220 aa4.07□□□□□ -1.76
HERC1-211ENST00000560983 KIF26AQ9ULI4 1882 aaPredicted RBP4.07□□□□□ -1.76
HERC1-211ENST00000560983 NUP205Q92621 2012 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TTC41PQ6P2S7 1318 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 VWA8A3KMH1 1905 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 A0A1W2PR48 441 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 hCG_1642624A0A1W2PR95 340 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TCRBV21S2A2A0A5A6 115 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TMEM200CA6NKL6 621 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 B4GALT5O43286 388 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PPFIA2O75334 1257 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 RECQL4O94761 1208 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 KLF8O95600 359 aaPredicted RBP4.06□□□□□ -1.76
HERC1-211ENST00000560983 ABHD16AO95870 558 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 CYP3A4P08684 503 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 GNSP15586 552 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 GABRG2P18507 467 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 GABRR2P28476 465 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 HNF1BP35680 557 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 MATKP42679 507 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PTENP60484 403 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PHC1P78364 1004 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 CYP4A11Q02928 519 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 MBTD1Q05BQ5 628 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PDGFRLQ15198 375 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PCBP1Q15365 356 aaKnown RBP eCLIP4.06□□□□□ -1.76
HERC1-211ENST00000560983 ARL13BQ3SXY8 428 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 HES3Q5TGS1 186 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 IL27RAQ6UWB1 636 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TMEM150AQ86TG1 271 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 SRRM1Q8IYB3 904 aaKnown RBP4.06□□□□□ -1.76
HERC1-211ENST00000560983 RNF149Q8NC42 400 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 GPR150Q8NGU9 434 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 PROKR1Q8TCW9 393 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
HERC1-211ENST00000560983 PSMG2Q969U7 264 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 EXOC4Q96A65 974 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 MYEOVQ96EZ4 313 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 ZNF578Q96N58 590 aaPredicted RBP4.06□□□□□ -1.76
HERC1-211ENST00000560983 ANO3Q9BYT9 981 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 DPH1Q9BZG8 443 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 LINC00597Q9H2U6 94 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TOR3AQ9H497 397 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 DHX33Q9H6R0 707 aaKnown RBP4.06□□□□□ -1.76
HERC1-211ENST00000560983 RIC8AQ9NPQ8 531 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 CD93Q9NPY3 652 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 CALCOCO1Q9P1Z2 691 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 BCCIPQ9P287 314 aaKnown RBP eCLIP4.06□□□□□ -1.76
HERC1-211ENST00000560983 TMPRSS11EQ9UL52 423 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 CHST2Q9Y4C5 530 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 YIPF1Q9Y548 306 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 TNFRSF18Q9Y5U5 241 aa4.06□□□□□ -1.76
HERC1-211ENST00000560983 GOLGA4Q13439 2230 aaKnown RBP4.05□□□□□ -1.76
HERC1-211ENST00000560983 A0A1W2PQF6 199 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 H7C4K7 107 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 SYN3O14994 580 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 TBX3O15119 743 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 BCAT2O15382 392 aaPredicted RBP4.05□□□□□ -1.76
HERC1-211ENST00000560983 ASAP2O43150 1006 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 TRAPPC3O43617 180 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 PCDHGA12O60330 932 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 DNAJC6O75061 913 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 SOAT2O75908 522 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 ERLIN2O94905 339 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 PLEKHA8P1O95397 391 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 ASMTLO95671 621 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 CER1O95813 267 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 FOSP01100 380 aaPredicted RBP4.05□□□□□ -1.76
HERC1-211ENST00000560983 CDK4P11802 303 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 HK1P19367 917 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 BMP5P22003 454 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 GRK6P43250 576 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 ACADVLP49748 655 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 DNAJC3Q13217 504 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 KIF19Q2TAC6 998 aa4.05□□□□□ -1.76
HERC1-211ENST00000560983 CTXN3Q4LDR2 81 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms