RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SCAND2PQ9GZW5 306 aaPredicted RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 GOLPH3LQ9H4A5 285 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 STARD5Q9NSY2 213 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 TMEM51Q9NW97 253 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 SPASTQ9UBP0 616 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 TMX2-CTNND1H3BSU7 103 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 RNF103O00237 685 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 NTN3O00634 580 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 TERTO14746 1132 aaKnown RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 RAD51BO15315 384 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 SMAD6O43541 496 aaKnown RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 SNAP91O60641 907 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 PAGE1O75459 146 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 LEFTY1O75610 366 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 LETM1O95202 739 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 GJB6O95452 261 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 RHOCP08134 193 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 RRM1P23921 792 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 ITGB7P26010 798 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 L1CAMP32004 1257 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 PFN3P60673 137 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 NFATC3Q12968 1075 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 SGCGQ13326 291 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 PDE1CQ14123 709 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 DEFB133Q30KQ1 61 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 LINC00303Q3SY05 128 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 PERM1Q5SV97 790 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 DPY19L3Q6ZPD9 716 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 C14orf80Q86SX3 495 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 DENND6BQ8NEG7 585 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 SPATA20Q8TB22 786 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 LMX1AQ8TE12 382 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 KLF6Q99612 283 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 SEMA3CQ99985 751 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 CEP44Q9C0F1 390 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 WASF2Q9Y6W5 498 aa18.92■□□□□ 0.62
TPM1-226ENST00000560959 COL27A1Q8IZC6 1860 aaPredicted RBP18.92■□□□□ 0.62
TPM1-226ENST00000560959 BOD1L1Q8NFC6 3051 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 SYNJ2BP-COX16A0A087WUM0 186 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 TRIM49BA6NDI0 452 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 DRGXA6NNA5 263 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 LMO7DNF2Z398 122 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 TSPAN6O43657 245 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 ZNF821O75541 412 aaPredicted RBP18.91■□□□□ 0.62
TPM1-226ENST00000560959 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
TPM1-226ENST00000560959 KRT5P13647 590 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 PDX1P52945 283 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 EIF2B5Q13144 721 aaKnown RBP18.91■□□□□ 0.62
TPM1-226ENST00000560959 PNOCQ13519 176 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 SPIDRQ14159 915 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 PTK2BQ14289 1009 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 C6orf132Q5T0Z8 1188 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 C22orf39Q6P5X5 142 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 ATG14Q6ZNE5 492 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 HSCBQ8IWL3 235 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 RAB7BQ96AH8 199 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 SGF29Q96ES7 293 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 RRN3Q9NYV6 651 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 COX16Q9P0S2 106 aa18.91■□□□□ 0.62
TPM1-226ENST00000560959 BSNQ9UPA5 3926 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 CXorf51AA0A1B0GTR3 108 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 TOR1BO14657 336 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 PLD2O14939 933 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 MUSKO15146 869 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 SPINT1O43278 529 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 CNTN5O94779 1100 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 NOS2P35228 1153 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 ALFQ53S48 1182 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 BRMS1LQ5PSV4 323 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 SMYD5Q6GMV2 418 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 FOXR1Q6PIV2 292 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 FOXR2Q6PJQ5 311 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 ZNF783Q6ZMS7 281 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 ENOSF1Q7L5Y1 443 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 PLPP6Q8IY26 295 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 SLC35F3Q8IY50 421 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 ZNF683Q8IZ20 524 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 PCDH20Q8N6Y1 951 aaKnown RBP18.9■□□□□ 0.62
TPM1-226ENST00000560959 GRIN3AQ8TCU5 1115 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 DHTKD1Q96HY7 919 aaPredicted RBP18.9■□□□□ 0.62
TPM1-226ENST00000560959 C1orf74Q96LT6 269 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 CCDC3Q9BQI4 270 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 HEPHQ9BQS7 1158 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 SIK2Q9H0K1 926 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 ARHGEF38Q9NXL2 777 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 PADI4Q9UM07 663 aa18.9■□□□□ 0.62
TPM1-226ENST00000560959 UBR5O95071 2799 aaPredicted RBP18.89■□□□□ 0.62
TPM1-226ENST00000560959 COL12A1Q99715 3063 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 A0A0D9SEW6 157 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 PMS2P1A4D2B8 440 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 PSMA7O14818 248 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 THAP12O43422 761 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 SUV39H1O43463 412 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 GCATO75600 419 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 SMC2O95347 1197 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 GNA15P30679 374 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 PPP1R2P41236 205 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 SNX16P57768 344 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms