RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 PRKCIP41743 596 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 GRK6P43250 576 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 CCNHP51946 323 aaPredicted RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 C21orf59P57076 290 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 IL9RQ01113 521 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 NR1I3Q14994 352 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 SUZ12Q15022 739 aaKnown RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 ARSIQ5FYB1 569 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 PLEKHA7Q6IQ23 1121 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 RWDD4Q6NW29 188 aaKnown RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 PRPF39Q86UA1 669 aaKnown RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 IQCHQ86VS3 1027 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 SPATS2Q86XZ4 545 aaKnown RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 PLPP6Q8IY26 295 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 PNPLA1Q8N8W4 532 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 MFSD2AQ8NA29 543 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 TMEM145Q8NBT3 493 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 ISG20Q96AZ6 181 aaKnown RBP16.51■□□□□ 0.23
SPG21-211ENST00000560564 CDC6Q99741 560 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 FZD10Q9ULW2 581 aa16.51■□□□□ 0.23
SPG21-211ENST00000560564 TLR4O00206 839 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 RAMP2O60895 175 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 RNGTTO60942 597 aaKnown RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 KRT37O76014 449 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 MAMLD1Q13495 774 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 SETMARQ53H47 684 aaPredicted RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 CARD16Q5EG05 197 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 NEK5Q6P3R8 708 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 DNAAF5Q86Y56 855 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 SAP25Q8TEE9 199 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 SKA1Q96BD8 255 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 ERVMER34-1Q9H9K5 563 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 GDF3Q9NR23 364 aa16.5■□□□□ 0.23
SPG21-211ENST00000560564 ZFR2Q9UPR6 939 aaKnown RBP16.5■□□□□ 0.23
SPG21-211ENST00000560564 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 WASH4PA8MWX3 477 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 ATMINO43313 823 aaPredicted RBP16.49■□□□□ 0.23
SPG21-211ENST00000560564 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 ITGB7P26010 798 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 EPHA8P29322 1005 aaPredicted RBP16.49■□□□□ 0.23
SPG21-211ENST00000560564 RECQLP46063 649 aaPredicted RBP16.49■□□□□ 0.23
SPG21-211ENST00000560564 RXRGP48443 463 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 AIF1P55008 147 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 ZNF284Q2VY69 593 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 TMEM259Q4ZIN3 620 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 EFHC2Q5JST6 749 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 PPP1R2P3Q6NXS1 205 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 DCUN1D2Q6PH85 259 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 KANSL1Q7Z3B3 1105 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 TMC6Q7Z403 805 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 HORMAD1Q86X24 394 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 GATAD2AQ86YP4 633 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 HEPHQ9BQS7 1158 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 EDEM3Q9BZQ6 932 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 TM6SF2Q9BZW4 377 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 APOBEC2Q9Y235 224 aaKnown RBP16.49■□□□□ 0.23
SPG21-211ENST00000560564 CA5BQ9Y2D0 317 aa16.49■□□□□ 0.23
SPG21-211ENST00000560564 SYCE3A1L190 88 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 ANKRD62A6NC57 917 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 TMCO5BA8MYB1 307 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 PRAMEF26H0Y7S4 382 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.234e-10■■■■■ 32.4
SPG21-211ENST00000560564 KDELR3O43731 214 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 CAPNS1P04632 268 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 GZMAP12544 262 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 PRLRP16471 622 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 EPHB2P29323 1055 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 PBX1P40424 430 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 NEK3P51956 506 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 OVGP1Q12889 678 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
SPG21-211ENST00000560564 ASIC2Q16515 512 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 FIGNQ5HY92 759 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 SFMBT2Q5VUG0 894 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 SCYL2Q6P3W7 929 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 PARS2Q7L3T8 475 aaKnown RBP16.48■□□□□ 0.23
SPG21-211ENST00000560564 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 TRIM7Q9C029 511 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 KLC2Q9H0B6 622 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 HECAQ9UBI9 543 aaPredicted RBP16.48■□□□□ 0.23
SPG21-211ENST00000560564 LRRK1Q38SD2 2015 aa16.48■□□□□ 0.23
SPG21-211ENST00000560564 ANKRD36A6QL64 1941 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 TMEM191CA6NGB0 347 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 YKT6O15498 198 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 SPINT1O43278 529 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 GSRP00390 522 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 ADRB3P13945 408 aa16.47■□□□□ 0.23
SPG21-211ENST00000560564 GKP32189 559 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms