RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CHST14Q8NCH0 376 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 STK32AQ8WU08 396 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 SLC35C1Q96A29 364 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 LIN37Q96GY3 246 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 BOCQ9BWV1 1114 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 APOBEC3BQ9UH17 382 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 KLF15Q9UIH9 416 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 DOLKQ9UPQ8 538 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 PCDHGA7Q9Y5G6 932 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 OR51B4Q9Y5P0 310 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 BOD1L1Q8NFC6 3051 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 COL12A1Q99715 3063 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 EFSO43281 561 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 SNAP91O60641 907 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 LEFTY1O75610 366 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 FAM87AP0C7U9 286 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 KRT5P13647 590 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 ADRB3P13945 408 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 FMO5P49326 533 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 ADKP55263 362 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 PRRT3Q5FWE3 981 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 RRAGAQ7L523 313 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 RAB11FIP2Q7L804 512 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 KAT5Q92993 513 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 SLC4A5Q9BY07 1137 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 SIK2Q9H0K1 926 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 METTL14Q9HCE5 456 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 VPS51Q9UID3 782 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 PADI4Q9UM07 663 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 TBC1D30Q9Y2I9 924 aa18.19■□□□□ 0.5
TSPAN3-208ENST00000560514 K7ERQ8 282 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 NEMP1O14524 444 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 RAD51BO15315 384 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 PPFIA2O75334 1257 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 ENDOD1O94919 500 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 JMJD7P0C870 316 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 NME3Q13232 169 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 C1orf61Q13536 156 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 FGL2Q14314 439 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 MANEAQ5SRI9 462 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 DENND1BQ6P3S1 775 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 SLC35F3Q8IY50 421 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 SLC13A1Q9BZW2 595 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 TNKS2Q9H2K2 1166 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 RMND1Q9NWS8 449 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 HS3ST4Q9Y661 456 aa18.18■□□□□ 0.5
TSPAN3-208ENST00000560514 LMO7DNF2Z398 122 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 M0QYT0 321 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 LIPCP11150 499 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 ITGB6P18564 788 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 ITGB7P26010 798 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 NOS2P35228 1153 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 UGT1A5P35504 534 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 GGCXP38435 758 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 PRCPP42785 496 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 DNA2P51530 1060 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 IRAK1P51617 712 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 PDX1P52945 283 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 EIF4EBP2Q13542 120 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 TGIF1Q15583 401 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 FAXCQ5TGI0 409 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 DPY19L3Q6ZPD9 716 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 TMEM110Q86TL2 294 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 PHACTR4Q8IZ21 702 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 RBFAQ8N0V3 343 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 DCAF4L2Q8NA75 395 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 SCG3Q8WXD2 468 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 LENG8Q96PV6 779 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 GFM1Q96RP9 751 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 SEMA3CQ99985 751 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 ANKMY1Q9P2S6 941 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 GULP1Q9UBP9 304 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 PCDHB11Q9Y5F2 797 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 FADS3Q9Y5Q0 445 aa18.17■□□□□ 0.5
TSPAN3-208ENST00000560514 SPINT1O43278 529 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 AP1G1O43747 822 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 LETM1O95202 739 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 ADCY5O95622 1261 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 GLI1P08151 1106 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 L1CAMP32004 1257 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 GCNT1Q02742 428 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 EIF2B5Q13144 721 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 TAF5Q15542 800 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 ANKRD40Q6AI12 368 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 RETSATQ6NUM9 610 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 PPP1R13BQ96KQ4 1090 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 TMEM74Q96NL1 305 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 PSMB7Q99436 277 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 HEPHQ9BQS7 1158 aa18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 UBR5O95071 2799 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-208ENST00000560514 IGLON5A6NGN9 336 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms