RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 TGM2P21980 687 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 MCM3P25205 808 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 EPHB2P29323 1055 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 ACTN2P35609 894 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 DYNLT1P63172 113 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 CCNG2Q16589 344 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 GLE1Q53GS7 698 aaKnown RBP12.06□□□□□ -0.48
LDLR-212ENST00000560467 TXNRD3NBQ6F5E7 133 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 RFX8Q6ZV50 586 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 GSTA5Q7RTV2 222 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 NAXDQ8IW45 347 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 LZTR1Q8N653 840 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 TBC1D31Q96DN5 1066 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 SLC39A13Q96H72 371 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 ZNF419Q96HQ0 510 aaPredicted RBP12.06□□□□□ -0.48
LDLR-212ENST00000560467 RNF157Q96PX1 679 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 XPO6Q96QU8 1125 aaKnown RBP12.06□□□□□ -0.48
LDLR-212ENST00000560467 PLK2Q9NYY3 685 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 GPSM3Q9Y4H4 160 aa12.06□□□□□ -0.48
LDLR-212ENST00000560467 PI4KAP42356 2102 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 MYH10P35580 1976 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 MEI4A8MW99 385 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 MCF2LO15068 1137 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ACSL4O60488 711 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 STK10O94804 968 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 GAS8O95995 478 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 CISD3P0C7P0 127 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 MX2P20592 715 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 CHKAP35790 457 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 DGKGP49619 791 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 NRG1Q02297 640 aaPredicted RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 HNRNPDQ14103 355 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 LLGL1Q15334 1064 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 SYCP2LQ5T4T6 812 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ADGRF1Q5T601 910 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 TTC39BQ5VTQ0 682 aaPredicted RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 DCAF12L1Q5VU92 463 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 OTUD1Q5VV17 481 aaPredicted RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 C8orf74Q6P047 294 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 CHSY1Q86X52 802 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 DENND1CQ8IV53 801 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 KLHL7Q8IXQ5 586 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ZCCHC9Q8N567 271 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ADAMTS14Q8WXS8 1223 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 TOE1Q96GM8 510 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 CSPG4P5Q96PW8 444 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 KCTD15Q96SI1 283 aaPredicted RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 SUSD2Q9UGT4 822 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 ZNF148Q9UQR1 794 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 HEY1Q9Y5J3 304 aa12.05□□□□□ -0.48
LDLR-212ENST00000560467 MYO18AQ92614 2054 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 SMG1Q96Q15 3661 aaKnown RBP12.05□□□□□ -0.48
LDLR-212ENST00000560467 PLXND1Q9Y4D7 1925 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 PPP1R12AO14974 1030 aaPredicted RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 PHF2O75151 1096 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 IGLV3-27P01718 113 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 APOC2P02655 101 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CYBBP04839 570 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CD48P09326 243 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 GNSP15586 552 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 GOT1P17174 413 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CD6P30203 668 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CORO1AP31146 461 aaKnown RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 FNTAP49354 379 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 ARSEP51690 589 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 SLC14A1Q13336 389 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 EIF4EBP2Q13542 120 aaPredicted RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 AUHQ13825 339 aaKnown RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 PDK1Q15118 436 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 TAZQ16635 292 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CA9Q16790 459 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 FUT11Q495W5 492 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 WDR45BQ5MNZ6 344 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 TEX35Q5T0J7 233 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CCNI2Q6ZMN8 369 aaPredicted RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 Q6ZNB5 142 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 SYDE1Q6ZW31 735 aaPredicted RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 SLCO6A1Q86UG4 719 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CACUL1Q86Y37 369 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 ATL2Q8NHH9 583 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 FOXJ1Q92949 421 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 RPRD1AQ96P16 312 aaPredicted RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 KRT12Q99456 494 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 ZYG11BQ9C0D3 744 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 MKRN2Q9H000 416 aaKnown RBP12.04□□□□□ -0.48
LDLR-212ENST00000560467 BRD8Q9H0E9 1235 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 RAB6CQ9H0N0 254 aa12.04□□□□□ -0.48
LDLR-212ENST00000560467 MIR1-1HGQ9H1L0 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms