RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NEBLO76041 1014 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 DDHD2O94830 711 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 PARNO95453 639 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 CBX6O95503 412 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SELPP16109 830 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 FGFR3P22607 806 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 YY1P25490 414 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 ADSLP30566 484 aaPredicted RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 GCKP35557 465 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 MAPKAPK2P49137 400 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TUBP50607 506 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 RAP1GDS1P52306 607 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 AQP5P55064 265 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TBX4P57082 545 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TRIM32Q13049 653 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SLC12A1Q13621 1099 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 PARP15Q460N3 678 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 PAN2Q504Q3 1202 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 CERCAMQ5T4B2 595 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TMCO4Q5TGY1 634 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 RANBP10Q6VN20 620 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 ZC3HC1Q86WB0 502 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 SCN4BQ8IWT1 228 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 ZNF683Q8IZ20 524 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 UNC5BQ8IZJ1 945 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TEX26Q8N6G2 289 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 PDCD6IPQ8WUM4 868 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 LINC01599Q8WXQ3 324 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 OVCA2Q8WZ82 227 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 VPS39Q96JC1 886 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SLC39A8Q9C0K1 460 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 SIK2Q9H0K1 926 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 NMUR1Q9HB89 426 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 NMRAL1Q9HBL8 299 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 CD248Q9HCU0 757 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 ATP13A1Q9HD20 1204 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 TLR8Q9NR97 1041 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 IPO11Q9UI26 975 aaKnown RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 TLK1Q9UKI8 766 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 RIMKLBQ9ULI2 386 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.85□□□□□ -0.83
RTF1-206ENST00000560447 MYLKQ15746 1914 aa9.85□□□□□ -0.83
RTF1-206ENST00000560447 A0A087X1B8 175 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 DRGXA6NNA5 263 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 ATP9BO43861 1147 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 TRIM13O60858 407 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 IGLV3-27P01718 113 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 PRKCGP05129 697 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 ITGB1P05556 798 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 C2P06681 752 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 YWHAQP27348 245 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 SLC26A3P40879 764 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 OR1G1P47890 313 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 PAPOLAP51003 745 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 RABGGTBP53611 331 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 IL10RBQ08334 325 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 GPR17Q13304 367 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 C5orf22Q49AR2 442 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CTXN3Q4LDR2 81 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 HSP90AA5PQ58FG0 334 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 FSCBQ5H9T9 825 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 DENND5AQ6IQ26 1287 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 KDELC1Q6UW63 502 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CEP57Q86XR8 500 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 ZNF280BQ86YH2 543 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 ABI1Q8IZP0 508 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 TEX9Q8N6V9 391 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 HASPINQ8TF76 798 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 MCUR1Q96AQ8 359 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 TADA1Q96BN2 335 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CCDC126Q96EE4 140 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 MFSD3Q96ES6 412 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 IMP4Q96G21 291 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 CELF6Q96J87 481 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 ZNF599Q96NL3 588 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CCDC106Q9BWC9 280 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 FSD1LQ9BXM9 530 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CADM1Q9BY67 442 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 NMUR2Q9GZQ4 415 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 CHRAC1Q9NRG0 131 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 IARS2Q9NSE4 1012 aaKnown RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 TREX1Q9NSU2 369 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
RTF1-206ENST00000560447 RBM22Q9NW64 420 aaKnown RBP eCLIP9.84□□□□□ -0.83
RTF1-206ENST00000560447 OXSMQ9NWU1 459 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 RNF186Q9NXI6 227 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 ABI2Q9NYB9 513 aaPredicted RBP9.84□□□□□ -0.83
RTF1-206ENST00000560447 TMEM216Q9P0N5 145 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 HSFX1Q9UBD0 423 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 VTI1BQ9UEU0 232 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 TRIM33Q9UPN9 1127 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 DNAJC16Q9Y2G8 782 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 C15orf41Q9Y2V0 281 aa9.84□□□□□ -0.83
RTF1-206ENST00000560447 SNX10Q9Y5X0 201 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms