RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DDX56Q9NY93 547 aaKnown RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 OR12D3Q9UGF7 316 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 DPP7Q9UHL4 492 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 CDH7Q9ULB5 785 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 SH3BP1Q9Y3L3 701 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 ZFP37Q9Y6Q3 630 aaPredicted RBP5.36□□□□□ -1.55
SPG11-220ENST00000559933 MYOFQ9NZM1 2061 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 VCANP13611 3396 aa5.36□□□□□ -1.55
SPG11-220ENST00000559933 UNC79Q9P2D8 2635 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 COL4A2P08572 1712 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 FAM95CA0A1B0GW59 222 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 NEDD8-MDP1E9PL57 170 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 F5H5T6 163 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 KIF2AO00139 706 aaPredicted RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 DFFAO00273 331 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 GFRA2O00451 464 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 KRIT1O00522 736 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 APOL1O14791 398 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 DAPK3O43293 454 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 GJB3O75712 270 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 CYP17A1P05093 508 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ASGR2P07307 311 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ZSCAN5DPP0CG00 497 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ETS1P14921 441 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 VAV1P15498 845 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 HOXB8P17481 243 aaPredicted RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 TCP1P17987 556 aaKnown RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPG11-220ENST00000559933 MAOBP27338 520 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 HOXD9P28356 352 aaPredicted RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 HOXC13P31276 330 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ACVRL1P37023 503 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ARL4AP40617 200 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 GRIA4P48058 902 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SOX9P48436 509 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SLC11A2P49281 568 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 COG7P83436 770 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 OTUD4Q01804 1114 aaKnown RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 RING1Q06587 406 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SMAD4Q13485 552 aaKnown RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 TRIP13Q15645 432 aaPredicted RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 PPP2R5EQ16537 467 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 TAZQ16635 292 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ARL13BQ3SXY8 428 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 BOLA3Q53S33 107 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 FSCBQ5H9T9 825 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ATAT1Q5SQI0 421 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 LY6G5CQ5SRR4 150 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 CCDC181Q5TID7 509 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 NUGGCQ68CJ6 796 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SLC9A4Q6AI14 798 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 BBS12Q6ZW61 710 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 RTL10Q7L3V2 364 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ZDHHC13Q8IUH4 622 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ARHGAP12Q8IWW6 846 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 RCOR2Q8IZ40 523 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 CARNMT1Q8N4J0 409 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 NAT16Q8N8M0 369 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 TDRD5Q8NAT2 981 aaKnown RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 GLIS1Q8NBF1 620 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 LEMD2Q8NC56 503 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 OR7D4Q8NG98 312 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ACTL9Q8TC94 416 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ACTRT1Q8TDG2 376 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 USP33Q8TEY7 942 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SMARCD2Q92925 531 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 CHFRQ96EP1 664 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ZNF419Q96HQ0 510 aaPredicted RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 PBKQ96KB5 322 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 RPGRIP1Q96KN7 1286 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 HAPLN3Q96S86 360 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 TCF12Q99081 682 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 KRT12Q99456 494 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ZNF670Q9BS34 389 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 TRIM51Q9BSJ1 452 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 DCLK3Q9C098 648 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 DDX47Q9H0S4 455 aaKnown RBP5.35□□□□□ -1.55
SPG11-220ENST00000559933 OSBPL2Q9H1P3 480 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 L2HGDHQ9H9P8 463 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 NPHS2Q9NP85 383 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 HPS4Q9NQG7 708 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPG11-220ENST00000559933 DTLQ9NZJ0 730 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 ZNF212Q9UDV6 495 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 LCMT1Q9UIC8 334 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 CDC23Q9UJX2 597 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPG11-220ENST00000559933 HEY1Q9Y5J3 304 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 NUMBLQ9Y6R0 609 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 DOCK4Q8N1I0 1966 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 TICRRQ7Z2Z1 1910 aa5.35□□□□□ -1.55
SPG11-220ENST00000559933 IGLV3-10A0A075B6K4 115 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 A0A0D9SEW6 157 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 E2F8A0AVK6 867 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 LIASO43766 372 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 NARSO43776 548 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 SNAP91O60641 907 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms