RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 DQX1Q8TE96 717 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ALG14Q96F25 216 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CISHQ9NSE2 258 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 TMX2-CTNND1H3BSU7 103 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 VPS4BO75351 444 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 FYNP06241 537 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 TACR2P21452 398 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 CD82P27701 267 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 CHRNA3P32297 505 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 TXLNAP40222 546 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
SMAD3-206ENST00000558739 DEFB109BQ30KR1 87 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 UNC5BQ8IZJ1 945 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 SH2D3CQ8N5H7 860 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 SLC39A13Q96H72 371 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 MMRN2Q9H8L6 949 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 RDH14Q9HBH5 336 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 VPS4AQ9UN37 437 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
SMAD3-206ENST00000558739 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
SMAD3-206ENST00000558739 POLEQ07864 2286 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 IGLON5A6NGN9 336 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 FPGTO14772 594 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SMAD6O43541 496 aaKnown RBP12.12□□□□□ -0.47
SMAD3-206ENST00000558739 CNTN5O94779 1100 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 PDGFAP04085 211 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SRCP12931 536 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 RRM1P23921 792 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 IGFALSP35858 605 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 CDC20Q12834 499 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 E2F4Q16254 413 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 EFHC2Q5JST6 749 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SPRED1Q7Z699 444 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 TAC4Q86UU9 113 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 CACNA2D3Q8IZS8 1091 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 GALNT11Q8NCW6 608 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SEMA4DQ92854 862 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 ERCC4Q92889 916 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-206ENST00000558739 TCTN2Q96GX1 697 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 CMKLR1Q99788 373 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 HDAC8Q9BY41 377 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 TNKS2Q9H2K2 1166 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 DMAC2Q9NW81 257 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 SLC25A13Q9UJS0 675 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 GPR34Q9UPC5 381 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 FADS3Q9Y5Q0 445 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
SMAD3-206ENST00000558739 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 SNAP91O60641 907 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 LTFP02788 710 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 FGF3P11487 239 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 GGCXP38435 758 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 PLK1P53350 603 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 RPS21P63220 83 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 PITX1P78337 314 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 PTK2BQ14289 1009 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 ZC3H12AQ5D1E8 599 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 FAXCQ5TGI0 409 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 HEATR4Q86WZ0 1026 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 BTN2A2Q8WVV5 523 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 TSACCQ96A04 125 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
SMAD3-206ENST00000558739 FEM1AQ9BSK4 669 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 TNMDQ9H2S6 317 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 OR51B4Q9Y5P0 310 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
SMAD3-206ENST00000558739 CROCCQ5TZA2 2017 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 EFCAB7A8K855 629 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 LEFTY1O75610 366 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 ENDOD1O94919 500 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 ADRB3P13945 408 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 ABL2P42684 1182 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 THOP1P52888 689 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 SLC8A3P57103 927 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 EIF2S3LQ2VIR3 472 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms