RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 RAB17Q9H0T7 212 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 BHMT2Q9H2M3 363 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 RABEP2Q9H5N1 569 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 NHEJ1Q9H9Q4 299 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 RNPEPL1Q9HAU8 725 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CPNE5Q9HCH3 593 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 DMAP1Q9NPF5 467 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 PPANQ9NQ55 473 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 DDX21Q9NR30 783 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 SERTAD4Q9NUC0 356 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PANK4Q9NVE7 773 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 RMND1Q9NWS8 449 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TAB2Q9NYJ8 693 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CPNE7Q9UBL6 633 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CIDEBQ9UHD4 219 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 BAIAP2L1Q9UHR4 511 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ANAPC4Q9UJX5 808 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 NFU1Q9UMS0 254 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ZNF510Q9Y2H8 683 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 NHSL1Q5SYE7 1610 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 LAMB1P07942 1786 aa3.4□□□□□ -1.86
HERC1-203ENST00000558532 TRIM43BA6NCK2 446 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 WIPF3A6NGB9 483 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ZSCAN5CA6NGD5 496 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 F8VZ95 297 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 H0YIZ8 118 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CCDC188H7C350 402 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TRAFD1O14545 582 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 ZNF213O14771 459 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SLC16A3O15427 465 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 RAD51CO43502 376 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 KLRC4O43908 158 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SNX3O60493 162 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TLR5O60602 858 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 PEX11AO75192 247 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 RBMXL2O75526 392 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 NXPH3O95157 252 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 DEXIO95424 95 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TTLL1O95922 423 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ZBED1O96006 694 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 FGAP02671 866 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 HRGP04196 525 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 KRT16P08779 473 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 EBLN1P0CF75 366 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TPBGLP0DKB5 382 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CYP2C9P11712 490 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 GPD1P21695 349 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CALB2P22676 271 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SP100P23497 879 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 LRPAP1P30533 357 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CCT6AP40227 531 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 MSH2P43246 934 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TRAPPC10P48553 1259 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CCT8P50990 548 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 STX17P56962 302 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 C21orf58P58505 322 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 KCNJ2P63252 427 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 POU5F1Q01860 360 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 UBXN1Q04323 297 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 DEUP1Q05D60 604 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SULT2A1Q06520 285 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 KLC1Q07866 573 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ALX1Q15699 326 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 GSTA3Q16772 222 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 GFOD2Q3B7J2 385 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CCDC88AQ3V6T2 1871 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 COLEC12Q5KU26 742 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 AKNAD1Q5T1N1 836 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TREML2Q5T2D2 321 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CCDC181Q5TID7 509 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 HHATQ5VTY9 493 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 DCAF12L1Q5VU92 463 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 NFRKBQ6P4R8 1299 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SYCE2Q6PIF2 218 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 USP49Q70CQ1 688 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 C10orf71Q711Q0 1435 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ZNF551Q7Z340 670 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 ATG9AQ7Z3C6 839 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 AMIGO2Q86SJ2 522 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 LCA5Q86VQ0 697 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 RASAL3Q86YV0 1011 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 LMNTD2Q8IXW0 634 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 LRRC43Q8N309 656 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 RASGEF1CQ8N431 466 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 CNBD1Q8NA66 436 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TBC1D16Q8TBP0 767 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 MIPOL1Q8TD10 442 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ACTRT1Q8TDG2 376 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ATP8B4Q8TF62 1192 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ZNF384Q8TF68 577 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TEKT4Q8WW24 435 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 NELFBQ8WX92 580 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 RAPGEF4Q8WZA2 1011 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 IRGQQ8WZA9 623 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SYN2Q92777 582 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 INPP5DQ92835 1189 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 KIFAP3Q92845 792 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms