RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 CORO2BQ9UQ03 480 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 MYO3AQ8NEV4 1616 aa11.9□□□□□ -0.51
CSPG4P12-201ENST00000558282 ISPDA4D126 451 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 LIASO43766 372 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 UGT2B4P06133 528 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CCNB1P14635 433 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CYP2F1P24903 491 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 PSMA1P25786 263 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 MGAT1P26572 445 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 MAPK12P53778 367 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 INSCQ1MX18 579 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC35C1Q96A29 364 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 VPS35Q96QK1 796 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ACOX2Q99424 681 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CCDC177Q9NQR7 707 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 EXD2Q9NVH0 621 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 TNPO3Q9Y5L0 923 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NCF1BA6NI72 391 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NCF1CA8MVU1 366 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NDUFS2O75306 463 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CHRNGP07510 517 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NCF1P14598 390 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 GPD2P43304 727 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC7A2P52569 658 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 EMC2Q15006 297 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CARTPTQ16568 116 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 FAAH2Q6GMR7 532 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC22A4Q9H015 551 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 IFT80Q9P2H3 777 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 AIREO43918 545 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 TIPRLO75663 272 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CYP1A2P05177 515 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 PBX1P40424 430 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 DDI2Q5TDH0 399 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 DIRAS2Q96HU8 199 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 GNG14A0A1W2PPG7 69 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 I3L521 148 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 UBXN8O00124 270 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZW10O43264 779 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NRP2O60462 931 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SERPIND1P05546 499 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 IDO1P14902 403 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 CHKAP35790 457 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 GRIA4P48058 902 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRKG2Q13237 762 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 MED22Q15528 200 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 XRRA1Q6P2D8 792 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZNF720Q7Z2F6 126 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 NSMCE3Q96MG7 304 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 TRMOQ9BU70 441 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 ADI1Q9BV57 179 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 IGSF9Q9P2J2 1179 aa11.89□□□□□ -0.51
CSPG4P12-201ENST00000558282 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 DNAJA2O60884 412 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 CABYRO75952 493 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 OR6B1O95007 311 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 BMP10O95393 424 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 MAGP20916 626 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 PNPLA4P41247 253 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 DDX39BQ13838 428 aaKnown RBP11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 NTRK3Q16288 839 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 USP43Q70EL4 1123 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 TDRPQ86YL5 185 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 PLEKHO2Q8TD55 490 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC38A2Q96QD8 506 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 CGRRF1Q99675 332 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 FICDQ9BVA6 458 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 TDRD1Q9BXT4 1180 aaKnown RBP11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 CLPBQ9H078 707 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 TAS2R13Q9NYV9 303 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 PACSIN3Q9UKS6 424 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 PDE10AQ9Y233 779 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC22A2O15244 555 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 CDC40O60508 579 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SEC22BO75396 215 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 KHDRBS3O75525 346 aaKnown RBP11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SWI5Q1ZZU3 235 aa11.88□□□□□ -0.51
CSPG4P12-201ENST00000558282 SV2CQ496J9 727 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms