RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MYL1P05976 194 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 FYNP06241 537 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PAEPP09466 180 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 CDK11BP21127 795 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 TBXAS1P24557 533 aaPredicted RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 CD82P27701 267 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ACADSBP45954 432 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 MXI1P50539 228 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 BLKP51451 505 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 CUL2Q13617 745 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 CUL4AQ13619 759 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PDE1CQ14123 709 aaPredicted RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 FAXCQ5TGI0 409 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 TMEM164Q5U3C3 297 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 SEL1L3Q68CR1 1132 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 OR6B2Q6IFH4 312 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 LVRNQ6Q4G3 990 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 Q6ZVU0 165 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 BEND5Q7L4P6 421 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PTRH1Q86Y79 214 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 FAM26EQ8N5C1 309 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ATP11CQ8NB49 1132 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 OR6C4Q8NGE1 309 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ZNF564Q8TBZ8 553 aaPredicted RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 ASB12Q8WXK4 309 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 FAM149B1Q96BN6 582 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ALG14Q96F25 216 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 EEF2KMTQ96G04 330 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PAGE5Q96GU1 130 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 TBATAQ96M53 351 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PSMG3-AS1Q96PY0 264 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 MED15Q96RN5 788 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PRR14Q9BWN1 585 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 HDAC8Q9BY41 377 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 GPR27Q9NS67 375 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 GMPR2Q9P2T1 348 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 PISDQ9UG56 409 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 USP25Q9UHP3 1055 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 SERTAD1Q9UHV2 236 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 KLF15Q9UIH9 416 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ANAPC2Q9UJX6 822 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 VPS28Q9UK41 221 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 ZFR2Q9UPR6 939 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 MAN2B2Q9Y2E5 1009 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PAXBP1Q9Y5B6 917 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 TENM4Q6N022 2769 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 NYNRINQ9P2P1 1898 aaKnown RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 CFAP46Q8IYW2 2715 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 PTPN13Q12923 2485 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 A0A1W2PQ27 194 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 A0A1W2PQ64 194 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 A0A1W2PQC6 194 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TOR1BO14657 336 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CETN3O15182 167 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TSPAN6O43657 245 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CLDN11O75508 207 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 GCATO75600 419 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TRUB2O95900 331 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 CTSLP07711 333 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 EPB41P11171 864 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 SRCP12931 536 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CTSEP14091 401 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 HGFP14210 728 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CCKBRP32239 447 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CASRP41180 1078 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CCR10P46092 362 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 ME1P48163 572 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 NUMBP49757 651 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 NEK3P51956 506 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 THOP1P52888 689 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 YPEL5P62699 121 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 YWHAZP63104 245 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 CCL7P80098 99 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CDK17Q00537 523 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 SLC20A2Q08357 652 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 C1orf61Q13536 156 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CLCA4Q14CN2 919 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 ELOCQ15369 112 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 IGFBP7Q16270 282 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 SKIDA1Q1XH10 827 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TMEM259Q4ZIN3 620 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 PRRT3Q5FWE3 981 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TCERG1LQ5VWI1 586 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 SYPL2Q5VXT5 272 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 RESP18Q5W5W9 173 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 FBXL22Q6P050 247 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 BORAQ6PGQ7 559 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TMEM270Q6UE05 265 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TAC4Q86UU9 113 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 SLC35F3Q8IY50 421 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 SDR16C5Q8N3Y7 309 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 FSTL5Q8N475 847 aaPredicted RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 OR2A12Q8NGT7 310 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CLEC4CQ8WTT0 213 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 TFAP2BQ92481 460 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 USP7Q93009 1102 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 RAB7BQ96AH8 199 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms