RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
LDLR-207ENST00000558013 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.32
LDLR-207ENST00000558013 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 MYL4P12829 197 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CXCR3P49682 368 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 PLK1P53350 603 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CDH17Q12864 832 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CEACAM7Q14002 265 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 ANO4Q32M45 955 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
LDLR-207ENST00000558013 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 GBP5Q96PP8 586 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 NR1H4Q96RI1 486 aaPredicted RBP13.07□□□□□ -0.32
LDLR-207ENST00000558013 NPAS2Q99743 824 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 FICDQ9BVA6 458 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 DRC3Q9H069 523 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CNGB3Q9NQW8 809 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 DNAJB4Q9UDY4 337 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
LDLR-207ENST00000558013 MT-CO1P00395 513 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 POMCP01189 267 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 KCNA5P22460 613 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 AXLP30530 894 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CRYBB1P53674 252 aaPredicted RBP13.07□□□□□ -0.32
LDLR-207ENST00000558013 PCSK7Q16549 785 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 LIPMQ5VYY2 423 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 ZYG11AQ6WRX3 759 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 DQX1Q8TE96 717 aaKnown RBP13.07□□□□□ -0.32
LDLR-207ENST00000558013 SH3RF2Q8TEC5 729 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 EPAS1Q99814 870 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
LDLR-207ENST00000558013 MYADML2A6NDP7 307 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TARM1B6A8C7 271 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 SLC1A2P43004 574 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 NPY2RP49146 381 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TAS2R39P59534 338 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 GSTA3Q16772 222 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 ARHGAP12Q8IWW6 846 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 GPR78Q96P69 363 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 RHOJQ9H4E5 214 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ST3GAL5Q9UNP4 418 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 NEU3Q9UQ49 428 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 RAP2CQ9Y3L5 183 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ARL5CA6NH57 179 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 FBXO21O94952 628 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 OR6B1O95007 311 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TSPAN8P19075 237 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 CSRP3P50461 194 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 HNRNPDQ14103 355 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 SEPT6Q14141 434 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 LDB1Q86U70 411 aaPredicted RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 KIFC1Q9BW19 673 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TRHDEQ9UKU6 1024 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TMEM114B3SHH9 223 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 NCAM2O15394 837 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 PGM3O95394 542 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ITGB1P05556 798 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ZNF865P0CJ78 1059 aaPredicted RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 UQCRBP14927 111 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 MED21Q13503 144 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TLR1Q15399 786 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ZNF470Q6ECI4 717 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ITPRIPL1Q6GPH6 555 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 CNSTQ6PJW8 725 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 ADGRG6Q86SQ4 1221 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 LILRA2Q8N149 483 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 KYQ8NBH2 561 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 SLC39A8Q9C0K1 460 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
LDLR-207ENST00000558013 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
LDLR-207ENST00000558013 PDCD11Q14690 1871 aaKnown RBP13.05□□□□□ -0.32
LDLR-207ENST00000558013 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 FAM95CA0A1B0GW59 222 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 RGSL1A5PLK6 1076 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 THP07101 528 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 HCAR3P49019 387 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
LDLR-207ENST00000558013 CDC42EP1Q00587 391 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 FOLH1Q04609 750 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 NAPEPLDQ6IQ20 393 aa13.05□□□□□ -0.32
LDLR-207ENST00000558013 PKN3Q6P5Z2 889 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms