RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MAELQ96JY0 434 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 ZMAT2Q96NC0 199 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 APBA2Q99767 749 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 APOL2Q9BQE5 337 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TMEM79Q9BSE2 394 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 MLPHQ9BV36 600 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 LRRC4Q9HBW1 653 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PNPLA3Q9NST1 481 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TUBGCP4Q9UGJ1 667 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TRHDEQ9UKU6 1024 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 ACOT9Q9Y305 439 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PCDHGA7Q9Y5G6 932 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 A0A1B0GTW7 788 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 KCNU1A8MYU2 1149 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TARM1B6A8C7 271 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 AP3B1O00203 1094 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 SDHDO14521 159 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 IRF6O14896 467 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TPH1P17752 444 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 ERCC2P18074 760 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NMBRP28336 390 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 AVPR1AP37288 418 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 SULT2A1Q06520 285 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 ADIGQ0VDE8 80 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 TRAP1Q12931 704 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NME3Q13232 169 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 LPIN1Q14693 890 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 DGKDQ16760 1214 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 UGP2Q16851 508 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 LPCAT2Q7L5N7 544 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 RIN3Q8TB24 985 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 LRTOMTQ8WZ04 291 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NDRG1Q92597 394 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NT5C3BQ969T7 300 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 PPP1R14BQ96C90 147 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 RMND5BQ96G75 393 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 NPY6RQ99463 290 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 BRD8Q9H0E9 1235 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 CXCL16Q9H2A7 254 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 CAAP1Q9H8G2 361 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 XPR1Q9UBH6 696 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 GJA3Q9Y6H8 435 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 RALGAPA2Q2PPJ7 1873 aa11.98□□□□□ -0.49
VIPAS39-211ENST00000557658 HEATR9A2RTY3 570 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 E7ENX8 843 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 H3BNH8 94 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 XPO1O14980 1071 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 IMPDH2P12268 514 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 NFKB1P19838 968 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 CD68P34810 354 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 GALK1P51570 392 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 TUBA4AP68366 448 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 CDH17Q12864 832 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 TMED1Q13445 227 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 PIGZQ86VD9 579 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SLC41A1Q8IVJ1 513 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 CENPLQ8N0S6 344 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 EFHD1Q9BUP0 239 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 PCDHAC1Q9H158 963 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 NCKIPSDQ9NZQ3 722 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 HACD3Q9P035 362 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SNX13Q9Y5W8 968 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SHROOM3Q8TF72 1996 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 CSPG5O95196 566 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 DNAJB2P25686 324 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 LMO2P25791 158 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SLC7A1P30825 629 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 POLD2P49005 469 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SCNN1BP51168 640 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 NAPEPLDQ6IQ20 393 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 BNIPLQ7Z465 357 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 RBM12BQ8IXT5 1001 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 PELI3Q8N2H9 469 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 LPGAT1Q92604 370 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 WNT8BQ93098 351 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 ABTB1Q969K4 478 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 PBXIP1Q96AQ6 731 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 C18orf25Q96B23 403 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 SNX27Q96L92 541 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 BIRC8Q96P09 236 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 GTSE1Q9NYZ3 720 aa11.97□□□□□ -0.49
VIPAS39-211ENST00000557658 TPI1P60174 286 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 RAB10P61026 200 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 SQLEQ14534 574 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 PRPSAP1Q14558 356 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 ZBTB6Q15916 424 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 AFAP1L2Q8N4X5 818 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 KLHL23Q8NBE8 558 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 HM13Q8TCT9 377 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms