RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 HSPH1Q92598 858 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 BIRC7Q96CA5 298 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 GDAP1L1Q96MZ0 367 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 OSBPL1AQ9BXW6 950 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 TM6SF2Q9BZW4 377 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 NHEJ1Q9H9Q4 299 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 PREBQ9HCU5 417 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 NDFIP2Q9NV92 336 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 HECAQ9UBI9 543 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 UBA2Q9UBT2 640 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 FCF1Q9Y324 198 aaKnown RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 A0A1W2PPC4 97 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 IPO7O95373 1038 aaKnown RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 KRT7P08729 469 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 TMEM253P0C7T8 217 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 GRIA4P48058 902 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 RHOAP61586 193 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 RACK1P63244 317 aaKnown RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 ZNF252P-AS1Q0IIN9 211 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 CNTN1Q12860 1018 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 SERINC3Q13530 473 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 GRM3Q14832 879 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 ARSIQ5FYB1 569 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 NEK5Q6P3R8 708 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 FBXL19Q6PCT2 694 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 TMCO3Q6UWJ1 677 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 ERN2Q76MJ5 926 aaKnown RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 RHOT2Q8IXI1 618 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 MINDY1Q8N5J2 469 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 PAF1Q8N7H5 531 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 HMCESQ96FZ2 354 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 KCTD15Q96SI1 283 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 MAGEB5Q9BZ81 275 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 ZDHHC6Q9H6R6 413 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 SP110Q9HB58 689 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 SERGEFQ9UGK8 458 aa14.06□□□□□ -0.16
VPS33B-206ENST00000557358 CNOT1A5YKK6 2376 aaKnown RBP14.06□□□□□ -0.16
VPS33B-206ENST00000557358 GOLGA6L6A8MZA4 724 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 DFFAO00273 331 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 KRIT1O00522 736 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 NEMP1O14524 444 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
VPS33B-206ENST00000557358 LEFTY1O75610 366 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 TMCC1O94876 653 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 PCDH8O95206 1070 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 ERCC2P18074 760 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 XPAP23025 273 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-206ENST00000557358 ITGB7P26010 798 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 NEK3P51956 506 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 GRIK2Q13002 908 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 SLC14A1Q13336 389 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 SUZ12Q15022 739 aaKnown RBP14.05□□□□□ -0.16
VPS33B-206ENST00000557358 SPA17Q15506 151 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 DPYSL2Q16555 572 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 SETMARQ53H47 684 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-206ENST00000557358 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 TMCO4Q5TGY1 634 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 RAB7BQ96AH8 199 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 PEBP4Q96S96 227 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 HDAC8Q9BY41 377 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 HAUS2Q9NVX0 235 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 DMTF1Q9Y222 760 aa14.05□□□□□ -0.16
VPS33B-206ENST00000557358 DFNA5O60443 496 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 PALMO75781 387 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 PROSCO94903 275 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 RARAP10276 462 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 DRD3P35462 400 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CYLC1P35663 651 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 ARHGAP25P42331 645 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CDH6P55285 790 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 HNRNPDQ14103 355 aaKnown RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 RFTN1Q14699 578 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CA9Q16790 459 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 MYLK3Q32MK0 819 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 PPM1JQ5JR12 505 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 TRIM69Q86WT6 500 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 ARFGAP1Q8N6T3 406 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 KCTD6Q8NC69 237 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CHST14Q8NCH0 376 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CELF6Q96J87 481 aaKnown RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 FEM1CQ96JP0 617 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms