RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TTC17Q96AE7 1141 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ISG20Q96AZ6 181 aaKnown RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TEKT5Q96M29 485 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 PSKH2Q96QS6 385 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 MGME1Q9BQP7 344 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 CEP41Q9BYV8 373 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 FRMD8Q9BZ67 464 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 DPH5Q9H2P9 285 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 LRRC40Q9H9A6 602 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 HEBP1Q9NRV9 189 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 WHRNQ9P202 907 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 FBXO10Q9UK96 956 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TPX2Q9ULW0 747 aaKnown RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 OR51B4Q9Y5P0 310 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 CKAP5Q14008 2032 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 EDDM13A0A1B0GTR0 161 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SYNCRIPO60506 623 aaKnown RBP11.37□□□□□ -0.59
SHMT2-220ENST00000555634 GSRP00390 522 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 HLA-DQB2P05538 268 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ITIH2P19823 946 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 NFKB1P19838 968 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 GLDCP23378 1020 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 PSMB4P28070 264 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SERPINA4P29622 427 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 OPRD1P41143 372 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-220ENST00000555634 CDK16Q00536 496 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SLC7A5Q01650 507 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SLC10A7Q0GE19 358 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 WASHC5Q12768 1159 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 MPP3Q13368 585 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SLC14A2Q15849 920 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ARTNQ5T4W7 220 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 LEKR1Q6ZMV7 388 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 KIAA0907Q7Z7F0 614 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ADIPOR2Q86V24 386 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 TP53INP2Q8IXH6 220 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 NDUFAF2Q8N183 169 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 MYRIPQ8NFW9 859 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 OR2AP1Q8NGE2 309 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 OR52K2Q8NGK3 314 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
SHMT2-220ENST00000555634 FAM3CQ92520 227 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ASB2Q96Q27 587 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ADGRE3Q9BY15 652 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 SLC25A51Q9H1U9 297 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 C10orf88Q9H8K7 445 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 GLOD4Q9HC38 313 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 EPB41L5Q9HCM4 733 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 PRDM6Q9NQX0 595 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 EIF2B3Q9NR50 452 aaKnown RBP11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ARHGEF3Q9NR81 526 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 VPS45Q9NRW7 570 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 ANAPC5Q9UJX4 755 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 CLEC4EQ9ULY5 219 aa11.37□□□□□ -0.59
SHMT2-220ENST00000555634 C5orf42Q9H799 3197 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 A0A1W2PQ67 120 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 OTOL1A6NHN0 477 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 DNALI1O14645 258 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 BNIP3LO60238 219 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 RNASEH1O60930 286 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ZMPSTE24O75844 475 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SEC31AO94979 1220 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 CISD3P0C7P0 127 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SRCP12931 536 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 RPL22P35268 128 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 PTGIRP43119 386 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SOX9P48436 509 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 NUMBP49757 651 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 STK19P49842 368 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SCNN1BP51168 640 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SEMA5AQ13591 1074 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 PON2Q15165 354 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ZNF513Q8N8E2 541 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 EIF1ADQ8N9N8 165 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 LRRN4Q8WUT4 740 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 IFT81Q8WYA0 676 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 OR8D1Q8WZ84 308 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ALG14Q96F25 216 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 PPP1R16AQ96I34 528 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 RPL10LQ96L21 214 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 FCRL5Q96RD9 977 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 NUDCD1Q96RS6 583 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 TUBGCP5Q96RT8 1024 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 SEMA3CQ99985 751 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 OSBPL1AQ9BXW6 950 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 FOXP3Q9BZS1 431 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms