RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NT5MQ9NPB1 228 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 FNIP2Q9P278 1114 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 ZNF212Q9UDV6 495 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 CAPN14A8MX76 684 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 RALBP11234 206 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 WNT3AP56704 352 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 CTBP1Q13363 440 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 RINLQ6ZS11 566 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 REM2Q8IYK8 340 aaPredicted RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 ATP6V0D2Q8N8Y2 350 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 BTN2A3PQ96KV6 586 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 PNPOQ9NVS9 261 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 MIA3Q5JRA6 1907 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 SLC12A8A0AV02 714 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 TTC24A2A3L6 582 aaPredicted RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 HNRNPCL1O60812 293 aaKnown RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 RTN3O95197 1032 aaPredicted RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 GALTP07902 379 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 MPP1Q00013 466 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 CNGA3Q16281 694 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 ANO4Q32M45 955 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 POTEHQ6S545 545 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 PRSS55Q6UWB4 352 aaPredicted RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 MAVSQ7Z434 540 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 PPHLN1Q8NEY8 458 aaKnown RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 PIWIL2Q8TC59 973 aaKnown RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 GIPC2Q8TF65 315 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 MYCBPQ99417 103 aaPredicted RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 SLC25A51Q9H1U9 297 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 RHOJQ9H4E5 214 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 CCSER2Q9H7U1 834 aa24.62■■□□□ 1.53
TMEM260-207ENST00000555497 TLR8Q9NR97 1041 aaKnown RBP24.62■■□□□ 1.53
TMEM260-207ENST00000555497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 NEBLO76041 1014 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 IGLV3-27P01718 113 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 SAT1P21673 171 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 TUBB3Q13509 450 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 BFSP2Q13515 415 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 HNRNPDQ14103 355 aaKnown RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 NAPRTQ6XQN6 538 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 CCDC117Q8IWD4 279 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 MFSD6LQ8IWD5 586 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 CNTN4Q8IWV2 1026 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 SLAIN1Q8ND83 568 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 PSMG2Q969U7 264 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 BTBD10Q9BSF8 475 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 TUBB6Q9BUF5 446 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 TREX1Q9NSU2 369 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 LRFN2Q9ULH4 789 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 PHGDHO43175 533 aaKnown RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 CCDC22O60826 627 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 GM2AP17900 193 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 SLC8A1P32418 973 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 SLC25A41Q8N5S1 370 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 SPPL2BQ8TCT7 592 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 IMP4Q96G21 291 aaKnown RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 C1QTNF1Q9BXJ1 281 aa24.61■■□□□ 1.53
TMEM260-207ENST00000555497 OXCT2Q9BYC2 517 aaPredicted RBP24.61■■□□□ 1.53
TMEM260-207ENST00000555497 ADAM12O43184 909 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 MMP2P08253 660 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 CALB2P22676 271 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 GRK2P25098 689 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 NUMBP49757 651 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 ABCE1P61221 599 aaKnown RBP24.6■■□□□ 1.53
TMEM260-207ENST00000555497 NADSYN1Q6IA69 706 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 PABPC5Q96DU9 382 aaKnown RBP24.6■■□□□ 1.53
TMEM260-207ENST00000555497 SPATA17Q96L03 361 aa24.6■■□□□ 1.53
TMEM260-207ENST00000555497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 ESRRAP11474 423 aaPredicted RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 AVPR1AP37288 418 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 HARS2P49590 506 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 RENBPP51606 427 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 ALDH18A1P54886 795 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 DSC2Q02487 901 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 SEPT6Q14141 434 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 SLC41A1Q8IVJ1 513 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 TMEM151AQ8N4L1 468 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 SEPT8Q92599 483 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 RILPQ96NA2 401 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 NMRAL1Q9HBL8 299 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 OLA1Q9NTK5 396 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 NSMCE4AQ9NXX6 385 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 TAS2R1Q9NYW7 299 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 DRGXA6NNA5 263 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 TBKBP1A7MCY6 615 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 USP10Q14694 798 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 NPAS4Q8IUM7 802 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 WDR75Q8IWA0 830 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 SCLYQ96I15 445 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 PPP1R2P1Q96PQ5 205 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 CCDC106Q9BWC9 280 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 MRM3Q9HC36 420 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 ATP13A1Q9HD20 1204 aa24.59■■□□□ 1.53
TMEM260-207ENST00000555497 CPSF2Q9P2I0 782 aaKnown RBP24.59■■□□□ 1.53
TMEM260-207ENST00000555497 GSC2O15499 205 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 SBK3P0C264 359 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 ZDHHC11BP0C7U3 371 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 ATF6P18850 670 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 CD86P42081 329 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms