RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 GDF3Q9NR23 364 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 FZD10Q9ULW2 581 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 MSRB2Q9Y3D2 182 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 SCINQ9Y6U3 715 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 FAM170AA1A519 330 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 TMEM191CA6NGB0 347 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 H0Y8X5 98 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 LEFTY1O75610 366 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 WNT1P04628 370 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 PROS1P07225 676 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 EPHB2P29323 1055 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 PBX1P40424 430 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 RXRGP48443 463 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 ARRB1P49407 418 aaPredicted RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 NUMBP49757 651 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 CCNHP51946 323 aaPredicted RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 NEK3P51956 506 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 NXPH1P58417 271 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 SNRPD1P62314 119 aaKnown RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 PPP2CBP62714 309 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 PPP2CAP67775 309 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 FAM193AP78312 1265 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 STAT4Q14765 748 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 KCNT1Q5JUK3 1230 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 ZNF571Q7Z3V5 609 aaPredicted RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 HORMAD1Q86X24 394 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 CHST14Q8NCH0 376 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 OR2AP1Q8NGE2 309 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 RHBDD1Q8TEB9 315 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 CAMK1GQ96NX5 476 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 SCNM1Q9BWG6 230 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 OSBPL1AQ9BXW6 950 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 ISCUQ9H1K1 167 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 CBX8Q9HC52 389 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 MRPL47Q9HD33 250 aaKnown RBP12.06□□□□□ -0.48
VRK1-204ENST00000555351 NDFIP2Q9NV92 336 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 TAS2R14Q9NYV8 317 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 DNAI1Q9UI46 699 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 TMEM131Q92545 1883 aa12.06□□□□□ -0.48
VRK1-204ENST00000555351 TP53BP1Q12888 1972 aaPredicted RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 SYCE3A1L190 88 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 TNFSF14O43557 240 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 BNIP3LO60238 219 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 RNF8O76064 485 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 POP4O95707 220 aaKnown RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 FTLP02792 175 aaPredicted RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 FTH1P19P0C7X4 201 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 CDK4P11802 303 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 ACVRL1P37023 503 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 HCAR3P49019 387 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 NDST2P52849 883 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 FANCCQ00597 558 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 ZNF284Q2VY69 593 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 KIAA1161Q6NSJ0 714 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 DCP2Q8IU60 420 aaKnown RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 KDF1Q8NAX2 398 aaPredicted RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 TMEM145Q8NBT3 493 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 ASB12Q8WXK4 309 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 ARHGEF26Q96DR7 871 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 TNKS2Q9H2K2 1166 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 HECAQ9UBI9 543 aaPredicted RBP12.05□□□□□ -0.48
VRK1-204ENST00000555351 MFHAS1Q9Y4C4 1052 aa12.05□□□□□ -0.48
VRK1-204ENST00000555351 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
VRK1-204ENST00000555351 CHD8Q9HCK8 2581 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 PLK4O00444 970 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.48
VRK1-204ENST00000555351 WNT9AO14904 365 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 TSPAN6O43657 245 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 ADRB3P13945 408 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 HNRNPA2B1P22626 353 aaKnown RBP12.04□□□□□ -0.48
VRK1-204ENST00000555351 PSMA2P25787 234 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 AKT2P31751 481 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 SUOXP51687 545 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 UBASH3AP57075 661 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 RPS21P63220 83 aaKnown RBP12.04□□□□□ -0.48
VRK1-204ENST00000555351 ZBED6P86452 979 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 OGDHQ02218 1023 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 RAD51Q06609 339 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 SERINC3Q13530 473 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 GRM3Q14832 879 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 ZNF805Q5CZA5 627 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 ERMARDQ5T6L9 678 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 E4F1Q66K89 784 aaPredicted RBP12.04□□□□□ -0.48
VRK1-204ENST00000555351 HGSNATQ68CP4 663 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 FBXL19Q6PCT2 694 aa12.04□□□□□ -0.48
VRK1-204ENST00000555351 LAYNQ6UX15 382 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms