RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 BCAR3O75815 825 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 SEC14L2O76054 403 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 CTSAP10619 480 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 POU1F1P28069 291 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 EPHB2P29323 1055 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 BSGP35613 385 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARL3P36405 182 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 RPL7AP62424 266 aaKnown RBP5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 EIF4A2Q14240 407 aaKnown RBP5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ME3Q16798 604 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 SERTAD4-AS1Q5TG53 156 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 TBC1D9BQ66K14 1250 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 DEF8Q6ZN54 512 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 KDELC2Q7Z4H8 507 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 TMC8Q8IU68 726 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ADSSL1Q8N142 457 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZMIZ2Q8NF64 920 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 GDPD5Q8WTR4 605 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZG16BQ96DA0 208 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZNF419Q96HQ0 510 aaPredicted RBP5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 KLHL15Q96M94 604 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 TMPRSS5Q9H3S3 457 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 SNTG1Q9NSN8 517 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 KIAA1456Q9P272 454 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 HSPB7Q9UBY9 170 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 TRBV5-7A0A0A0MS05 114 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 SMIM35A0A1B0GVV1 85 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 FAM157AC9JC47 383 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 TACC1O75410 805 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 IRF1P10914 325 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 MPGP29372 298 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 CPOXP36551 454 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 DPP6P42658 865 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 RPS3AP61247 264 aaKnown RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZNF91Q05481 1191 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 PRKG2Q13237 762 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 MAMLD1Q13495 774 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 DCTN2Q13561 401 aaKnown RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 DAZAP2Q15038 168 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 TAF11Q15544 211 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 SYTL3Q4VX76 610 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 SPATA1Q5VX52 437 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 PAPD7Q5XG87 772 aaKnown RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 ITPRIPL1Q6GPH6 555 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 CNGA4Q8IV77 575 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 KCNG4Q8TDN1 519 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 WIPF2Q8TF74 440 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 WDR83Q9BRX9 315 aaKnown RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 TMX4Q9H1E5 349 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 SPAG4Q9NPE6 437 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 C20orf141Q9NUB4 165 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC4A4Q9Y6R1 1079 aa5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARHGEF17Q96PE2 2063 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP1-201ENST00000555221 TRBV5-3A0A0A0MS03 114 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 FSD2A1L4K1 749 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 TP73O15350 636 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 RBMXL2O75526 392 aaKnown RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 TIPRLO75663 272 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SPARCP09486 303 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 ACADMP11310 421 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 UNGP13051 313 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 LAMP2P13473 410 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC2A4P14672 509 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PTPN2P17706 415 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PTGER1P34995 402 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARHGAP25P42331 645 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 GPR12P47775 334 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 HMGA2P52926 109 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 GSTA3Q16772 222 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC45A4Q5BKX6 768 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 ENTPD8Q5MY95 495 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SNX30Q5VWJ9 437 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 ATG9BQ674R7 924 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 NCAPH2Q6IBW4 605 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC18B1Q6NT16 456 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CDC73Q6P1J9 531 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 KLHL24Q6TFL4 600 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 MOB3CQ70IA8 216 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC46A3Q7Z3Q1 461 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PXKQ7Z7A4 578 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CCDC105Q8IYK2 499 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZDHHC23Q8IYP9 409 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CNTROBQ8N137 903 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CMASQ8NFW8 434 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 BARD1Q99728 777 aaKnown RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PRKRIP1Q9H875 184 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 BRF2Q9HAW0 419 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PNRC2Q9NPJ4 139 aaKnown RBP5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 PCDHB16Q9NRJ7 776 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 CDH22Q9UJ99 828 aa5.74□□□□□ -1.49
CKS1BP1-201ENST00000555221 A0A096LPK6 155 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 LDLRAD4O15165 306 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 HEXAP06865 529 aa5.73□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZNF8P17098 575 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms