RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FAM114A2Q9NRY5 505 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 RBM22Q9NW64 420 aaKnown RBP eCLIP10.95□□□□□ -0.66
TDP1-211ENST00000555178 PIH1D1Q9NWS0 290 aaKnown RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 WHRNQ9P202 907 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 TPX2Q9ULW0 747 aaKnown RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 CA14Q9ULX7 337 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 TTC28Q96AY4 2481 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 DOCK9Q9BZ29 2069 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 KRBA1A5PL33 1030 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 K7EQS6 105 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 EGFP01133 1207 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 APRTP07741 180 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 ACTN2P35609 894 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 GRIA1P42261 906 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 DRG2P55039 364 aaKnown RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 IL10RBQ08334 325 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CALCOCO2Q13137 446 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CUL1Q13616 776 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 SPARCL1Q14515 664 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 KCNJ11Q14654 390 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 ATXN7L2Q5T6C5 722 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 FSTL4Q6MZW2 842 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CSGALNACT1Q8TDX6 532 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 AENQ8WTP8 325 aaKnown RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 TNKS2Q9H2K2 1166 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 DONSONQ9NYP3 566 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 DEC1Q9P2X7 70 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 ANAPC5Q9UJX4 755 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 SLC27A6Q9Y2P4 619 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 MTF2Q9Y483 593 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 USP34Q70CQ2 3546 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CKAP5Q14008 2032 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 TTC34A8MYJ7 566 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 INSIG1O15503 277 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 OPHN1O60890 802 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 KAT7O95251 611 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 MT-CYBP00156 380 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 SRCP12931 536 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 HLA-EP13747 358 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 WASP42768 502 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 SEC13P55735 322 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 NIPAL4Q0D2K0 466 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 HP1BP3Q5SSJ5 553 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 EGFLAMQ63HQ2 1017 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 GRAMD4Q6IC98 578 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 TIGD7Q6NT04 549 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 NAT8LQ8N9F0 302 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 TERB1Q8NA31 727 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 DCAF4L2Q8NA75 395 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 OR6K2Q8NGY2 324 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CCHCR1Q8TD31 782 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 OXNAD1Q96HP4 312 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 MLPHQ9BV36 600 aaPredicted RBP10.94□□□□□ -0.66
TDP1-211ENST00000555178 GBA3Q9H227 469 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 LHX3Q9UBR4 397 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 MUTYHQ9UIF7 546 aa10.94□□□□□ -0.66
TDP1-211ENST00000555178 CCDC151A5D8V7 595 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 DYNC1I1O14576 645 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 USP12O75317 370 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 AVILO75366 819 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 STK10O94804 968 aaKnown RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 TMCC1O94876 653 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 SRFP11831 508 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 ITIH2P19823 946 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 MMP13P45452 471 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 DSC2Q02487 901 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 SLC44A4Q53GD3 710 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 MARC1Q5VT66 337 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 CCDC25Q86WR0 208 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 RUBCNQ92622 972 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 TTC17Q96AE7 1141 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 LRRC45Q96CN5 670 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 SMIM14Q96QK8 99 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 FMO2Q99518 471 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 SLC2A11Q9BYW1 496 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 UBA2Q9UBT2 640 aaPredicted RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 ERVW-1Q9UQF0 538 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 WDFY4Q6ZS81 3184 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 TBC1D3BA6NDS4 549 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 MMP2P08253 660 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 ITKQ08881 620 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 NR1H3Q13133 447 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 SEMA5AQ13591 1074 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 FASTKD3Q14CZ7 662 aaKnown RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 PTPRRQ15256 657 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 MSS51Q4VC12 460 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 BEND6Q5SZJ8 279 aaPredicted RBP10.93□□□□□ -0.66
TDP1-211ENST00000555178 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms