RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MIF4GDA9UHW6 222 aaKnown RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 DFFAO00273 331 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 PRAMEF11O60813 436 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 SIN3BO75182 1162 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 PALMO75781 387 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 MT-CO1P00395 513 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 IL1BP01584 269 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 C1QTNF9P0C862 333 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 SRCP12931 536 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 TNNT1P13805 278 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 TCF4P15884 667 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 CD6P30203 668 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 P2RY2P41231 377 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 NR2C2P49116 596 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 STK19P49842 368 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 IL10RBQ08334 325 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 DPYSL3Q14195 570 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 DAB2IPQ5VWQ8 1189 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 AFMIDQ63HM1 303 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 TXNRD3NBQ6F5E7 133 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 TIGD7Q6NT04 549 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 LINGO4Q6UY18 593 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 PEX26Q7Z412 305 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 KATNAL2Q8IYT4 538 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 TSC1Q92574 1164 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 FAF2Q96CS3 445 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 HMCESQ96FZ2 354 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 PPP1R16AQ96I34 528 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 ALS2CR12Q96Q35 445 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 OMDQ99983 421 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 HEPHQ9BQS7 1158 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 LACRTQ9GZZ8 138 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 MKRN2Q9H000 416 aaKnown RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 BRD8Q9H0E9 1235 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 PCED1AQ9H1Q7 454 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 NOL6Q9H6R4 1146 aaKnown RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 SP110Q9HB58 689 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 DYRK4Q9NR20 520 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 POLR3BQ9NW08 1133 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 IPO11Q9UI26 975 aaKnown RBP10.79□□□□□ -0.68
TMEM260-206ENST00000555046 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 DUSP10Q9Y6W6 482 aa10.79□□□□□ -0.68
TMEM260-206ENST00000555046 COL4A2P08572 1712 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MYOFQ9NZM1 2061 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 APOL1O14791 398 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 SLC30A4O14863 429 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 ZSCAN12O43309 604 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 FOXD2O60548 495 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 NEBLO76041 1014 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 GSRP00390 522 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 KRT1P04264 644 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 CES1P23141 567 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 CHRNA3P32297 505 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 SLC8A1P32418 973 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 HSPA9P38646 679 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MAPK8P45983 427 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 TPMTP51580 245 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 COPAP53621 1224 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 RWDD2BP57060 319 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 ARF5P84085 180 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 ZNF33AQ06730 810 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 NSUN2Q08J23 767 aaKnown RBP eCLIP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PAFAH1B3Q15102 231 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PDK1Q15118 436 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 CST6Q15828 149 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MYLK3Q32MK0 819 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MAP7D1Q3KQU3 841 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 TFDP3Q5H9I0 405 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 SYCP2LQ5T4T6 812 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 LAIR1Q6GTX8 287 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 C22orf39Q6P5X5 142 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 UNQ6494/PRO21346Q6UXR6 183 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PRR23BQ6ZRT6 265 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MMAAQ8IVH4 418 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 STK40Q8N2I9 435 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 RYBPQ8N488 228 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 CADM4Q8NFZ8 388 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 OR2A12Q8NGT7 310 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 EXD1Q8NHP7 514 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 CELF6Q96J87 481 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 GDAP1L1Q96MZ0 367 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 FERMT1Q9BQL6 677 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 DESI2Q9BSY9 194 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 OSBPL1AQ9BXW6 950 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 TPSD1Q9BZJ3 242 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 BTBD1Q9H0C5 482 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PABPC3Q9H361 631 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 KDM4CQ9H3R0 1056 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 SGK2Q9HBY8 427 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms