RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 GABBR2O75899 941 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 CSH1P0DML2 217 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 CSH2P0DML3 217 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 SYN1P17600 705 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 HDCP19113 662 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 RENBPP51606 427 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 USP10Q14694 798 aaKnown RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 TAF1BQ53T94 588 aaPredicted RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 TPGS1Q6ZTW0 290 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 TBC1D10AQ9BXI6 508 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 OCEL1Q9H607 264 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 TRHDEQ9UKU6 1024 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 MTMR11A4FU01 709 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 HAUS5O94927 633 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 WEE1P30291 646 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 OXCT1P55809 520 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 SMAD3P84022 425 aaKnown RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 SLC9A4Q6AI14 798 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 STRA8Q7Z7C7 330 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 LINC00523Q86TU6 105 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 FAM192AQ9GZU8 254 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 C12orf65Q9H3J6 166 aaKnown RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 C11orf49Q9H6J7 331 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 PLK2Q9NYY3 685 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 FGF10O15520 208 aaPredicted RBP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 CXCL14O95715 111 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 CTNNB1P35222 781 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PPIDQ08752 370 aaKnown RBP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 NAT8LQ8N9F0 302 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 CORO1BQ9BR76 489 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 ADAM7Q9H2U9 754 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 GKN1Q9NS71 199 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 SYBUQ9NX95 663 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PARP14Q460N5 1801 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 BOLA2-SMG1P6H3BVE0 249 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 VAV1P15498 845 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 AVPR1AP37288 418 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 ATP1A4Q13733 1029 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 CERCAMQ5T4B2 595 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 ZBTB46Q86UZ6 589 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 FITM2Q8N6M3 262 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 TCP10LQ8TDR4 215 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.282e-7■■□□□ 14.5
PCNX1-209ENST00000554879 MYLK2Q9H1R3 596 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 SARS2Q9NP81 518 aaKnown RBP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 KCNU1A8MYU2 1149 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 M0QZQ0 153 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 MT-CYBP00156 380 aaPredicted RBP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 CDH17Q12864 832 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 EBNA1BP2Q99848 306 aaKnown RBP16.8■□□□□ 0.28
PCNX1-209ENST00000554879 ACSS3Q9H6R3 686 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PPCSQ9HAB8 311 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PITPNM1O00562 1244 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PSMD3O43242 534 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 VAPBO95292 243 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PIRTP0C851 137 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 AIF1P55008 147 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 TEX44Q53QW1 395 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 NXNQ6DKJ4 435 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 IYDQ6PHW0 289 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 FAM13CQ8NE31 585 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 ANKRD27Q96NW4 1050 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 TMEM30AQ9NV96 361 aa16.8■□□□□ 0.28
PCNX1-209ENST00000554879 PABPN1LA6NDY0 278 aaKnown RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 RPA3P35244 121 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 SPRP35270 261 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 CD86P42081 329 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 KDSRQ06136 332 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 NCCRP1Q6ZVX7 275 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 VPS39Q96JC1 886 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 PLXNA1Q9UIW2 1896 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 H0YGN5 161 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 KCNQ1P51787 676 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 PLEKHG4Q58EX7 1191 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 PLPP4Q5VZY2 271 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 CCNYL1Q8N7R7 359 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 ZBTB8BQ8NAP8 495 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 NFS1Q9Y697 457 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 ARHGAP10A1A4S6 786 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 TLL1O43897 1013 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 ADRA1DP25100 572 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 PTPN3P26045 913 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 CXCR3P49682 368 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 SERPINB9P50453 376 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 KPNA1P52294 538 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF598Q86UK7 904 aaKnown RBP16.79■□□□□ 0.28
PCNX1-209ENST00000554879 SLC2A13Q96QE2 648 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 NAT9Q9BTE0 207 aa16.79■□□□□ 0.28
PCNX1-209ENST00000554879 PARNO95453 639 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 CYBBP04839 570 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 IL4RP24394 825 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 GABRR2P28476 465 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 LBX1P52954 281 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 GPR17Q13304 367 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 RNF219Q5W0B1 726 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 CNKSR3Q6P9H4 555 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms