RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TMEM132BQ14DG7 1078 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PCLAFQ15004 111 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MAPRE1Q15691 268 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SLC9B1Q4ZJI4 515 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 DSG4Q86SJ6 1040 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 DCP2Q8IU60 420 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 FAM20CQ8IXL6 584 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ANKFN1Q8N957 763 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MFSD2AQ8NA29 543 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RAB2BQ8WUD1 216 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 FAF2Q96CS3 445 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 C17orf80Q9BSJ5 609 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SMYD2Q9NRG4 433 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SMOXQ9NWM0 555 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CDY2AQ9Y6F7 541 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CDY1Q9Y6F8 540 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 STX16-NPEPL1H3BU86 382 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CRYZL1O95825 349 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ABCB1P08183 1280 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CSH1P0DML2 217 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CSH2P0DML3 217 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MATN1P21941 496 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ARRB2P32121 409 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SERPINB9P50453 376 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ART3Q13508 389 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 NEDD8Q15843 81 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 N4BP2L1Q5TBK1 243 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SH3PXD2AQ5TCZ1 1133 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PLEKHG7Q6ZR37 379 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 FEM1CQ96JP0 617 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ACO2Q99798 780 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MTG1Q9BT17 334 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 NOL11Q9H8H0 719 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RSAD1Q9HA92 442 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MYOZ2Q9NPC6 264 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ZC3H7BQ9UGR2 993 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CPSF3Q9UKF6 684 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SLC27A5Q9Y2P5 690 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TCAF1Q9Y4C2 921 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PLIN3O60664 434 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SEC24DO94855 1032 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 HOXC6P09630 235 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TCN1P20061 433 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 NR4A2P43354 598 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MAPK10P53779 464 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 BACE1P56817 501 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CBLBQ13191 982 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 DNASE1L3Q13609 305 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 NOMO1Q15155 1222 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TARBP2Q15633 366 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CCDC58Q4VC31 144 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RAB6CQ53S08 254 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SLX4IPQ5VYV7 408 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 GADL1Q6ZQY3 521 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CHSY3Q70JA7 882 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 HERC6Q8IVU3 1022 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CLIP4Q8N3C7 705 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PACRGLQ8N7B6 248 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TOP1MTQ969P6 601 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TXNDC15Q96J42 360 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SPATA17Q96L03 361 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 PCYT2Q99447 389 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 MRPL4Q9BYD3 311 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RAB6CQ9H0N0 254 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 SNX25Q9H3E2 840 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RAB6BQ9NRW1 208 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 COL11A1P12107 1806 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 SOCS2O14508 198 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 SLC22A2O15244 555 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 OGTO15294 1046 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 GLRA3O75311 464 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 EGFRP00533 1210 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CKMT2P17540 419 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CXCL9Q07325 125 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 LDLRAP1Q5SW96 308 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 C10orf107Q8IVU9 208 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 TMEM130Q8N3G9 435 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 HCAR2Q8TDS4 363 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 EFHD1Q9BUP0 239 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 ADI1Q9BV57 179 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 PLAC1Q9HBJ0 212 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 TCF7L2Q9NQB0 619 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 KLQ9UEF7 1012 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 FAM172BPA6NC97 362 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 H7C0C1 242 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CHADO15335 359 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 SCO2O43819 266 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 VAPBO95292 243 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CPNE6O95741 557 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 PRKACBP22694 351 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 SLC7A1P30825 629 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 ATP5OP48047 213 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 NKX2-5P52952 324 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 YWHAZP63104 245 aaKnown RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 WDR78Q5VTH9 848 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms