RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 PNMA6AP0CW24 399 aaPredicted RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 ADRB3P13945 408 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 ITGB7P26010 798 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 SCNN1AP37088 669 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 LSSP48449 732 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 DNA2P51530 1060 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 GABREP78334 506 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 SLC20A2Q08357 652 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 SLC25A52Q3SY17 297 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 ZNF542PQ5EBM4 170 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 BROXQ5VW32 411 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 PCDH20Q8N6Y1 951 aaKnown RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 BMFQ96LC9 184 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 HEPHQ9BQS7 1158 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 CEP44Q9C0F1 390 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 CAAP1Q9H8G2 361 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 ATP13A1Q9HD20 1204 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 SPTY2D1-AS1A0A0U1RR47 76 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 POM121BA6NF01 834 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 AP1G1O43747 822 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZNF821O75541 412 aaPredicted RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 NEBLO76041 1014 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 MYF5P13349 255 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 NME1P15531 152 aaKnown RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 L1CAMP32004 1257 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 CDH5P33151 784 aaPredicted RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 RABIFP47224 123 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 GABRB2P47870 512 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 UCNP55089 124 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ERVPABLB-1P60509 514 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 SGCGQ13326 291 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 FGL2Q14314 439 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 FZD2Q14332 565 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 TPD52L1Q16890 204 aaPredicted RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZCCHC8Q6NZY4 707 aaKnown RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 PARGQ86W56 976 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 IRF2BP1Q8IU81 584 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 MAPK15Q8TD08 544 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 HAPLN3Q96S86 360 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 OSBPL2Q9H1P3 480 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 GPR27Q9NS67 375 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 NCKIPSDQ9NZQ3 722 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 IPO11Q9UI26 975 aaKnown RBP12.72□□□□□ -0.37
RDH11-207ENST00000554731 FADS3Q9Y5Q0 445 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 CSNK1G3Q9Y6M4 447 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 U3KQA8 63 aa12.72□□□□□ -0.37
RDH11-207ENST00000554731 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
RDH11-207ENST00000554731 FPGTO14772 594 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 RAD51BO15315 384 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 ZIC2O95409 532 aaPredicted RBP12.71□□□□□ -0.37
RDH11-207ENST00000554731 CSF2P04141 144 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 FLT3P36888 993 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
RDH11-207ENST00000554731 TMPRSS3P57727 454 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 GNA12Q03113 381 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 RAPGEF1Q13905 1077 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 MAN2A1Q16706 1144 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 TAF1BQ53T94 588 aaPredicted RBP12.71□□□□□ -0.37
RDH11-207ENST00000554731 ZNF605Q86T29 641 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 XYLT1Q86Y38 959 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 DRC7Q8IY82 874 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 ZNF843Q8N446 348 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 KCNE4Q8WWG9 221 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 ZDHHC6Q9H6R6 413 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 THSD1Q9NS62 852 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 ZNF212Q9UDV6 495 aa12.71□□□□□ -0.37
RDH11-207ENST00000554731 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
RDH11-207ENST00000554731 KALRNO60229 2985 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 CAPN8A6NHC0 703 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 GOLGA8SH3BPF8 625 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 ERVH48-1M5A8F1 160 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 NEMP1O14524 444 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 AQP9O43315 295 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 TSPAN6O43657 245 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
RDH11-207ENST00000554731 CYP11B1P15538 503 aa12.7□□□□□ -0.38
RDH11-207ENST00000554731 JUNDP17535 347 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms