RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 CD160O95971 181 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 MBD3O95983 291 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ERBB2P04626 1255 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 GP1BAP07359 652 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 GLI1P08151 1106 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 HNRNPA2B1P22626 353 aaKnown RBP11.81□□□□□ -0.52
TUBB3-204ENST00000554116 EEF1GP26641 437 aaKnown RBP11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ERVPABLB-1P60509 514 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 CDK17Q00537 523 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ZNF177Q13360 481 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 LINGO4Q6UY18 593 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 Q6ZSR6 202 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ERN2Q76MJ5 926 aaKnown RBP11.81□□□□□ -0.52
TUBB3-204ENST00000554116 SHC3Q92529 594 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 IFT43Q96FT9 208 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 VCPIP1Q96JH7 1222 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 NPY6RQ99463 290 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.81□□□□□ -0.52
TUBB3-204ENST00000554116 CALN1Q9BXU9 219 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 HDAC8Q9BY41 377 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 FAM204AQ9H8W3 233 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ASNSD1Q9NWL6 643 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ARHGEF38Q9NXL2 777 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 NLGN3Q9NZ94 848 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 ACTL7AQ9Y615 435 aa11.81□□□□□ -0.52
TUBB3-204ENST00000554116 LRRK2Q5S007 2527 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SPTY2D1-AS1A0A0U1RR47 76 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 FOXN3O00409 490 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 EFSO43281 561 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 LEFTY1O75610 366 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 WISP1O95388 367 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PAK4O96013 591 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SLC2A3P11169 496 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 ZNF18P17022 549 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 CXCR3P49682 368 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PDX1P52945 283 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 CDH4P55283 916 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 OXCT1P55809 520 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PTK2Q05397 1052 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 EIF2B5Q13144 721 aaKnown RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 DRAP1Q14919 205 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PTPN20Q4JDL3 420 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 DPY19L2P1Q6NXN4 242 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 GUSBP11Q6P575 273 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 DPY19L3Q6ZPD9 716 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PASD1Q8IV76 773 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 LSMEM2Q8N112 164 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 ATP11CQ8NB49 1132 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 ZNF548Q8NEK5 533 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 OR7D4Q8NG98 312 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 IFI44Q8TCB0 444 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 PPP1R13BQ96KQ4 1090 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SLC46A1Q96NT5 459 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 DEPDC7Q96QD5 511 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 TRIM62Q9BVG3 475 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SLC17A9Q9BYT1 436 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 VPS16Q9H269 839 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 TNKS2Q9H2K2 1166 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 TCEAL2Q9H3H9 227 aaPredicted RBP11.8□□□□□ -0.52
TUBB3-204ENST00000554116 ANO10Q9NW15 660 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SLC12A6Q9UHW9 1150 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 ENTPD2Q9Y5L3 495 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 FADS3Q9Y5Q0 445 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 HS3ST3A1Q9Y663 406 aa11.8□□□□□ -0.52
TUBB3-204ENST00000554116 SCN8AQ9UQD0 1980 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 LRRK1Q38SD2 2015 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 IGLV3-10A0A075B6K4 115 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 M0QYT0 321 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 KLK10O43240 276 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 HSF2BPO75031 334 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 CSF2P04141 144 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 TPM2P07951 284 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 PNMA6AP0CW24 399 aaPredicted RBP11.79□□□□□ -0.52
TUBB3-204ENST00000554116 NME1P15531 152 aaKnown RBP11.79□□□□□ -0.52
TUBB3-204ENST00000554116 AKT2P31751 481 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 KRT9P35527 623 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 NME3Q13232 169 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 RAPGEF1Q13905 1077 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 PERM1Q5SV97 790 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 CCDC183Q5T5S1 534 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 TRNP1Q6NT89 227 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 KYAT3Q6YP21 454 aaKnown RBP11.79□□□□□ -0.52
TUBB3-204ENST00000554116 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 BNIPLQ7Z465 357 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
TUBB3-204ENST00000554116 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 KCNE4Q8WWG9 221 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 MED8Q96G25 268 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 ATXN7L3BQ96GX2 97 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms