RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 AAK1Q2M2I8 961 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 ACCSLQ4AC99 568 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 DNAJC21Q5F1R6 531 aaKnown RBP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 FAXCQ5TGI0 409 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 MBLAC2Q68D91 279 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 NAPEPLDQ6IQ20 393 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 LINGO4Q6UY18 593 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 CCDC25Q86WR0 208 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 ZCCHC9Q8N567 271 aaKnown RBP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 CNTD1Q8N815 330 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 NAT8LQ8N9F0 302 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 MCUQ8NE86 351 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 ASIC4Q96FT7 647 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 FSD1LQ9BXM9 530 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 CIPCQ9C0C6 399 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 LRRC40Q9H9A6 602 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 XAB2Q9HCS7 855 aaKnown RBP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 HPS4Q9NQG7 708 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 EIF2B3Q9NR50 452 aaKnown RBP10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 VPS45Q9NRW7 570 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 ZDHHC18Q9NUE0 388 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 CLEC4EQ9ULY5 219 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
TMEM55B-205ENST00000554028 DENND4CQ5VZ89 1909 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TBC1D3BA6NDS4 549 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 F5H423 210 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 GOLGA8MH3BSY2 632 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 EIF3HO15372 352 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 PPFIA2O75334 1257 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TMCC1O94876 653 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 APODP05090 189 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SRPRAP08240 638 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SERPINF2P08697 491 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 CISD3P0C7P0 127 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 GJA4P35212 333 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 MAPK8P45983 427 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 RECQLP46063 649 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 NUMBP49757 651 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SERPINH1P50454 418 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SCNN1BP51168 640 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 ARF5P84085 180 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 PFKPQ01813 784 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 RAD51Q06609 339 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 MPP3Q13368 585 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 KCNJ11Q14654 390 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 CYTH1Q15438 398 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 HIF1AQ16665 826 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 KCTD19Q17RG1 926 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 FUT11Q495W5 492 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 RALGPS1Q5JS13 557 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 ZDHHC24Q6UX98 284 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 KIAA0907Q7Z7F0 614 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SLC44A3Q8N4M1 653 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 PAF1Q8N7H5 531 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 DNAAF3Q8N9W5 541 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TTC8Q8TAM2 541 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 PRCCQ92733 491 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TTC17Q96AE7 1141 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 IMP4Q96G21 291 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 LMLNQ96KR4 655 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 SEMA3CQ99985 751 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 RPP25Q9BUL9 199 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 CEP44Q9C0F1 390 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 C8orf33Q9H7E9 229 aaPredicted RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 KCNK12Q9HB15 430 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 TRPV5Q9NQA5 729 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 ELOVL2Q9NXB9 296 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 GTSE1Q9NYZ3 720 aa10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 INTS6Q9UL03 887 aaKnown RBP10.62□□□□□ -0.71
TMEM55B-205ENST00000554028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 AP2A1O95782 977 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 IGSF6O95976 241 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 DLDP09622 509 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 MLNP12872 115 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 H2AFXP16104 143 aaPredicted RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 CD68P34810 354 aaPredicted RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 CD86P42081 329 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 GRIA2P42262 883 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 SLC6A11P48066 632 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 MAXP61244 160 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 SNRPD1P62314 119 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 GEN1Q17RS7 908 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 ADIPOR2Q86V24 386 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 GSPT2Q8IYD1 628 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 RYBPQ8N488 228 aaPredicted RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 PCDH20Q8N6Y1 951 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 IPMKQ8NFU5 416 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms