RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SERTAD1Q9UHV2 236 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 TUBD1Q9UJT1 453 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 PADI4Q9UM07 663 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 C2CD3Q4AC94 2353 aa9.27□□□□□ -0.93
PRKCH-208ENST00000553846 CELSR1Q9NYQ6 3014 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 HIVEP3Q5T1R4 2406 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 A0A1W2PQ27 194 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 A0A1W2PQ64 194 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 A0A1W2PQC6 194 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 BLACEA4D250 179 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 M0QYV0 167 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 YY2O15391 372 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 SNAP91O60641 907 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 RHOBTB3O94955 611 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 TRUB2O95900 331 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 PAK4O96013 591 aaPredicted RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 APOEP02649 317 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 KRT13P13646 458 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ADRB3P13945 408 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 CD19P15391 556 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 TSHRP16473 764 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ITIH1P19827 911 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ITGB7P26010 798 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 GPD2P43304 727 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 OXCT1P55809 520 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 RPS21P63220 83 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 CCL7P80098 99 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 PRRT3Q5FWE3 981 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ZFAND4Q86XD8 727 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 PTRH1Q86Y79 214 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 SLITRK4Q8IW52 837 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 PHACTR4Q8IZ21 702 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 GUF1Q8N442 669 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ARL10Q8N8L6 244 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 DENND6BQ8NEG7 585 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 CCDC74AQ96AQ1 378 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 MIB2Q96AX9 1013 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 CENPTQ96BT3 561 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 IL12RB2Q99665 862 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 B3GNT4Q9C0J1 378 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 EPB41L5Q9HCM4 733 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 KCNK4Q9NYG8 393 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 ZNF212Q9UDV6 495 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
PRKCH-208ENST00000553846 VPS51Q9UID3 782 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 SLC25A13Q9UJS0 675 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 PCDHA7Q9UN72 937 aa9.26□□□□□ -0.93
PRKCH-208ENST00000553846 CSMD2Q7Z408 3487 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 CACNA1DQ01668 2161 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 LEFTY1O75610 366 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ZMPSTE24O75844 475 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PCDH8O95206 1070 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PRNPP04156 253 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 RRM1P23921 792 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 IGFALSP35858 605 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ABL2P42684 1182 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 RPIAP49247 311 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 CLCN6P51797 869 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 NEK3P51956 506 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ADKP55263 362 aaKnown RBP9.25□□□□□ -0.93
PRKCH-208ENST00000553846 POLE2P56282 527 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 KCNAB2Q13303 367 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 C1orf61Q13536 156 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 AUHQ13825 339 aaKnown RBP9.25□□□□□ -0.93
PRKCH-208ENST00000553846 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ACCSLQ4AC99 568 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 MANEAQ5SRI9 462 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 KCTD16Q68DU8 428 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 C22orf39Q6P5X5 142 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 DPY19L3Q6ZPD9 716 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PARS2Q7L3T8 475 aaKnown RBP9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ZSCAN30Q86W11 494 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 JAMLQ86YT9 394 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 SDR16C5Q8N3Y7 309 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 DCAF4L2Q8NA75 395 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
PRKCH-208ENST00000553846 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 BTN2A2Q8WVV5 523 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 KAT5Q92993 513 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 SLC2A13Q96QE2 648 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 MIS12Q9H081 205 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ANLNQ9NQW6 1124 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 SPASTQ9UBP0 616 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 PISDQ9UG56 409 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 GGT7Q9UJ14 662 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ANAPC2Q9UJX6 822 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 LOXL2Q9Y4K0 774 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ZFHX3Q15911 3703 aa9.25□□□□□ -0.93
PRKCH-208ENST00000553846 ADGRG4Q8IZF6 3080 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms