RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 C9orf64Q5T6V5 341 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 MARC1Q5VT66 337 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 HEATR6Q6AI08 1181 aaKnown RBP18.33■□□□□ 0.52
PSEN1-208ENST00000553719 Q6ZVU0 165 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 BMP8AQ7Z5Y6 402 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 TXNDC5Q8NBS9 432 aaKnown RBP18.33■□□□□ 0.52
PSEN1-208ENST00000553719 FLCNQ8NFG4 579 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 OR2A12Q8NGT7 310 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 TMEM121Q9BTD3 319 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 MTG2Q9H4K7 406 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 C2orf42Q9NWW7 574 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TARSL2A2RTX5 802 aaKnown RBP18.32■□□□□ 0.52
PSEN1-208ENST00000553719 RNF103O00237 685 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 PI15O43692 258 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 JCHAINP01591 159 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 COL9A1P20849 921 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 HSPA9P38646 679 aaKnown RBP18.32■□□□□ 0.52
PSEN1-208ENST00000553719 NNMTP40261 264 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 PAFAH1B1P43034 410 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 MAGEA9P43362 315 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 CSNK1DP48730 415 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 FNTAP49354 379 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 NRLP54845 237 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 SNX1Q13596 522 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TUBB2AQ13885 445 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 WHAMMP3Q1A5X7 153 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TEX44Q53QW1 395 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 FAM182AQ5T1J6 154 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 DARS2Q6PI48 645 aaKnown RBP18.32■□□□□ 0.52
PSEN1-208ENST00000553719 MAMSTRQ6ZN01 415 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 ZNF567Q8N184 647 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 NSMCE1Q8WV22 266 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TEKT5Q96M29 485 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 NSMCE3Q96MG7 304 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 VAT1Q99536 393 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 IER2Q9BTL4 223 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TUBB2BQ9BVA1 445 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 CINPQ9BW66 212 aaPredicted RBP18.32■□□□□ 0.52
PSEN1-208ENST00000553719 CEP41Q9BYV8 373 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 MFSD1Q9H3U5 465 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 PRSS16Q9NQE7 514 aa18.32■□□□□ 0.52
PSEN1-208ENST00000553719 RBM22Q9NW64 420 aaKnown RBP eCLIP18.32■□□□□ 0.52
PSEN1-208ENST00000553719 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 KCNN4O15554 427 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 SIN3BO75182 1162 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 EPHX1P07099 455 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 CD68P34810 354 aaPredicted RBP18.31■□□□□ 0.52
PSEN1-208ENST00000553719 COILP38432 576 aaPredicted RBP18.31■□□□□ 0.52
PSEN1-208ENST00000553719 WASP42768 502 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 CLCN5P51795 746 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 RHOAP61586 193 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 NSUN2Q08J23 767 aaKnown RBP eCLIP18.31■□□□□ 0.52
PSEN1-208ENST00000553719 ZNF235Q14590 738 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 EOGTQ5NDL2 527 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 KIAA1211LQ6NV74 962 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 TMEM92Q6UXU6 159 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 SYT13Q7L8C5 426 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 OR2AP1Q8NGE2 309 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 ARRDC2Q8TBH0 407 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 MAGOHBQ96A72 148 aaKnown RBP18.31■□□□□ 0.52
PSEN1-208ENST00000553719 TM6SF2Q9BZW4 377 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 SUN2Q9UH99 717 aa18.31■□□□□ 0.52
PSEN1-208ENST00000553719 CUL9Q8IWT3 2517 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 CCDC188H7C350 402 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 GCATO75600 419 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 GJB3O75712 270 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 DCNP07585 359 aaKnown RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 HOXB2P14652 356 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 STIP1P31948 543 aaKnown RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 CHRNA3P32297 505 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 KCNJ1P48048 391 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 COPAP53621 1224 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 IHHQ14623 411 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 CRY1Q16526 586 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 CARD16Q5EG05 197 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 ATXN7L2Q5T6C5 722 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 CCDC137Q6PK04 289 aaKnown RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 DPY19L3Q6ZPD9 716 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 SPEM1Q8N4L4 309 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 FAM71DQ8N9W8 422 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 GLIS1Q8NBF1 620 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 SPATA4Q8NEY3 305 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 SLCO2A1Q92959 643 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 TADA1Q96BN2 335 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 EXOC2Q96KP1 924 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 GDAP1L1Q96MZ0 367 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 SPATA13Q96N96 652 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 FAM129BQ96TA1 746 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 POLR1EQ9GZS1 481 aaKnown RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 DDX47Q9H0S4 455 aaKnown RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 L2HGDHQ9H9P8 463 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 POLR3BQ9NW08 1133 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-208ENST00000553719 SEPT10Q9P0V9 454 aa18.3■□□□□ 0.52
PSEN1-208ENST00000553719 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms