RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SLC39A11Q8N1S5 342 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 AGGF1Q8N302 714 aaeCLIP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 BBS5Q8N3I7 341 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 PPM1NQ8N819 430 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ANKRD42Q8N9B4 389 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 DNAAF3Q8N9W5 541 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF398Q8TD17 642 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 LRRC8CQ8TDW0 803 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 DEPDC1BQ8WUY9 529 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ARNTL2Q8WYA1 636 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 PGLYRP2Q96PD5 576 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 TGS1Q96RS0 853 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CPNE1Q99829 537 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 KIFC1Q9BW19 673 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SLC39A8Q9C0K1 460 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SLC25A51Q9H1U9 297 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 C11orf49Q9H6J7 331 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ACTR5Q9H9F9 607 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 RC3H2Q9HBD1 1191 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 GLOD4Q9HC38 313 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 OSER1Q9NX31 292 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SPG21Q9NZD8 308 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 TRPM5Q9NZQ8 1165 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 IPO11Q9UI26 975 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 STARD13Q9Y3M8 1113 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ASB3Q9Y575 518 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 FAM169AQ9Y6X4 670 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SLC12A8A0AV02 714 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 WDR27A2RRH5 827 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF840PA6NDX5 716 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TCP11X1B4DZS4 312 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 F5H5T6 163 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 C2CD2LO14523 706 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 COPEO14579 308 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 BIRC5O15392 142 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 MSI1O43347 362 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TIMM44O43615 452 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SNX3O60493 162 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RAMP2O60895 175 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CLDN11O75508 207 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TGDSO95455 350 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 VNN2O95498 520 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 MOCS2O96007 188 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 EPOP01588 193 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 GSTA1P08263 222 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 DHRS4L1P0CG22 281 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ATF6P18850 670 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PAMP19021 973 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 MGAT1P26572 445 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CD68P34810 354 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 OR1D2P34982 312 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CRHR1P34998 444 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RPA3P35244 121 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SPRP35270 261 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 GP5P40197 560 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 GPR15P49685 360 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 GATMP50440 423 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PAPOLAP51003 745 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CSE1LP55060 971 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CORO7P57737 925 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SESN2P58004 480 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 NIPAL4Q0D2K0 466 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ZBTB17Q13105 803 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TAF12Q16514 161 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TCTN1Q2MV58 587 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 LACTB2Q53H82 288 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PCID2Q5JVF3 399 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SPDYAQ5MJ70 313 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ARTNQ5T4W7 220 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PIK3R6Q5UE93 754 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 MARC1Q5VT66 337 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PDPK2PQ6A1A2 396 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RSPO2Q6UXX9 243 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 KYAT3Q6YP21 454 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF783Q6ZMS7 281 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC121Q6ZUS5 278 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SH2D5Q6ZV89 423 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CHST9Q7L1S5 443 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 NLRP9Q7RTR0 991 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SPATA21Q7Z572 469 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 NECAB2Q7Z6G3 386 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 DEFB128Q7Z7B8 93 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PRPF39Q86UA1 669 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 LMNTD2Q8IXW0 634 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TCEAL8Q8IYN2 117 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 LRRC34Q8IZ02 419 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 C4orf33Q8N1A6 199 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 TEX26Q8N6G2 289 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CNTD1Q8N815 330 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PEX13Q92968 403 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ISL2Q96A47 359 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CERS2Q96G23 380 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 OXNAD1Q96HP4 312 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 AGAP3Q96P47 875 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms