RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 PPP1R16AQ96I34 528 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 HEPHQ9BQS7 1158 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 HAUS4Q9H6D7 363 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 FZD10Q9ULW2 581 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 MYO6Q9UM54 1294 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 NEU3Q9UQ49 428 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 WASF2Q9Y6W5 498 aa18.27■□□□□ 0.52
PNN-202ENST00000553331 ACACBO00763 2458 aa18.27■□□□□ 0.51
PNN-202ENST00000553331 CABIN1Q9Y6J0 2220 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 C10orf142B7Z368 130 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 PCDHGA12O60330 932 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 ITGAVP06756 1048 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 GKP32189 559 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 OGDHQ02218 1023 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 INAVAQ3KP66 663 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 PPP1R15BQ5SWA1 713 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 TMC6Q7Z403 805 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 GLRX5Q86SX6 157 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 MFSD2AQ8NA29 543 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 BAHD1Q8TBE0 780 aaPredicted RBP18.26■□□□□ 0.51
PNN-202ENST00000553331 ADAMTS14Q8WXS8 1223 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 GATA6Q92908 595 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 MAGEH1Q9H213 219 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 FZD3Q9NPG1 666 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 GPATCH2LQ9NWQ4 482 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 DMTF1Q9Y222 760 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 MSRB2Q9Y3D2 182 aa18.26■□□□□ 0.51
PNN-202ENST00000553331 MAP1BP46821 2468 aaKnown RBP18.25■□□□□ 0.51
PNN-202ENST00000553331 CHD5Q8TDI0 1954 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 PRAMEF26H0Y7S4 382 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 KRIT1O00522 736 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 BUB1O43683 1085 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 CD160O95971 181 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 SKILP12757 684 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 PSMA2P25787 234 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 L1CAMP32004 1257 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 NUDT1P36639 197 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 PBX1P40424 430 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 GEMIN4P57678 1058 aaKnown RBP18.25■□□□□ 0.51
PNN-202ENST00000553331 NXPH1P58417 271 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 SCAPQ12770 1279 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
PNN-202ENST00000553331 MAMLD1Q13495 774 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 SHBQ15464 509 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 FBXL19Q6PCT2 694 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 ZNF571Q7Z3V5 609 aaPredicted RBP18.25■□□□□ 0.51
PNN-202ENST00000553331 HORMAD1Q86X24 394 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 SPATS2Q86XZ4 545 aaKnown RBP18.25■□□□□ 0.51
PNN-202ENST00000553331 EPAS1Q99814 870 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 HDAC8Q9BY41 377 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 TTYH3Q9C0H2 523 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 RETREG1Q9H6L5 497 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 FTSJ1Q9UET6 329 aa18.25■□□□□ 0.51
PNN-202ENST00000553331 TNFSF14O43557 240 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 KDELR3O43731 214 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 ARRB1P49407 418 aaPredicted RBP18.24■□□□□ 0.51
PNN-202ENST00000553331 NEK3P51956 506 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 KLHL30Q0D2K2 578 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 BNIP3Q12983 259 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 ATXN7L2Q5T6C5 722 aaPredicted RBP18.24■□□□□ 0.51
PNN-202ENST00000553331 E4F1Q66K89 784 aaPredicted RBP18.24■□□□□ 0.51
PNN-202ENST00000553331 SEL1L3Q68CR1 1132 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 EID2Q8N6I1 236 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 RTL3Q8N8U3 475 aaKnown RBP18.24■□□□□ 0.51
PNN-202ENST00000553331 KLHDC7BQ96G42 594 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 SYT11Q9BT88 431 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 TMEM121BQ9BXQ6 578 aaPredicted RBP18.24■□□□□ 0.51
PNN-202ENST00000553331 CATSPERBQ9H7T0 1116 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 PCSK1NQ9UHG2 260 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 ZMIZ1Q9ULJ6 1067 aa18.24■□□□□ 0.51
PNN-202ENST00000553331 PTPRBP23467 1997 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 MAGEC1O60732 1142 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 FTLP02792 175 aaPredicted RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 ADRB3P13945 408 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 ITGB7P26010 798 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 UBASH3AP57075 661 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 TPI1P60174 286 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 SNRPD1P62314 119 aaKnown RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 ZNF284Q2VY69 593 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 PPP1R2P3Q6NXS1 205 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 NEK5Q6P3R8 708 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 PARS2Q7L3T8 475 aaKnown RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 SAP25Q8TEE9 199 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 ZCCHC14Q8WYQ9 949 aaKnown RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 HMCESQ96FZ2 354 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 VCPIP1Q96JH7 1222 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 KLC2Q9H0B6 622 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 NOL6Q9H6R4 1146 aaKnown RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 TOR4AQ9NXH8 423 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
PNN-202ENST00000553331 ZFR2Q9UPR6 939 aaKnown RBP18.23■□□□□ 0.51
PNN-202ENST00000553331 TRPM6Q9BX84 2022 aa18.22■□□□□ 0.51
PNN-202ENST00000553331 RASA4BC9J798 803 aa18.22■□□□□ 0.51
PNN-202ENST00000553331 DDX3XO00571 662 aaKnown RBP eCLIP18.22■□□□□ 0.51
PNN-202ENST00000553331 NEMP1O14524 444 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms