RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF354CQ86Y25 554 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 RYBPQ8N488 228 aaPredicted RBP16.2■□□□□ 0.18
CDK4-215ENST00000553237 MFSD2AQ8NA29 543 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 HEPHQ9BQS7 1158 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 CNPY3Q9BT09 278 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 SYT11Q9BT88 431 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 MAGEH1Q9H213 219 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 HAUS4Q9H6D7 363 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 TOR4AQ9NXH8 423 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 HECAQ9UBI9 543 aaPredicted RBP16.2■□□□□ 0.18
CDK4-215ENST00000553237 HPCAL4Q9UM19 191 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 DMTF1Q9Y222 760 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 WASF2Q9Y6W5 498 aa16.2■□□□□ 0.18
CDK4-215ENST00000553237 USP24Q9UPU5 2620 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
CDK4-215ENST00000553237 CREB3O43889 395 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 PCDH8O95206 1070 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 SERPINC1P01008 464 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 ITGAVP06756 1048 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 EPHB2P29323 1055 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 L1CAMP32004 1257 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 TPM4P67936 248 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 SCAPQ12770 1279 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 POLD3Q15054 466 aaPredicted RBP16.19■□□□□ 0.18
CDK4-215ENST00000553237 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 E4F1Q66K89 784 aaPredicted RBP16.19■□□□□ 0.18
CDK4-215ENST00000553237 SPATS2Q86XZ4 545 aaKnown RBP16.19■□□□□ 0.18
CDK4-215ENST00000553237 NETO2Q8NC67 525 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 OR6K2Q8NGY2 324 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 RETREG1Q9H6L5 497 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 ZDHHC6Q9H6R6 413 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 FZD3Q9NPG1 666 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 FZD10Q9ULW2 581 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 FRYQ5TBA9 3013 aa16.19■□□□□ 0.18
CDK4-215ENST00000553237 KMT2BQ9UMN6 2715 aaPredicted RBP16.18■□□□□ 0.18
CDK4-215ENST00000553237 A0A1B0GTH6 734 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 PRAMEF26H0Y7S4 382 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 NUDT1P36639 197 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 BNIP3Q12983 259 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 MAMLD1Q13495 774 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 ZNF284Q2VY69 593 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 SFMBT2Q5VUG0 894 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 SEL1L3Q68CR1 1132 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 NEK5Q6P3R8 708 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
CDK4-215ENST00000553237 HORMAD1Q86X24 394 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 RTL3Q8N8U3 475 aaKnown RBP16.18■□□□□ 0.18
CDK4-215ENST00000553237 SAP25Q8TEE9 199 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 PPP1R16AQ96I34 528 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 KLC2Q9H0B6 622 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 NOL6Q9H6R4 1146 aaKnown RBP16.18■□□□□ 0.18
CDK4-215ENST00000553237 GPATCH2LQ9NWQ4 482 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 ZMIZ1Q9ULJ6 1067 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 ZFR2Q9UPR6 939 aaKnown RBP16.18■□□□□ 0.18
CDK4-215ENST00000553237 DOCK9Q9BZ29 2069 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 IGF2RP11717 2491 aa16.18■□□□□ 0.18
CDK4-215ENST00000553237 AKAP13Q12802 2813 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 A0A1W2PQC6 194 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 FAM221BA6H8Z2 402 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 TNFSF14O43557 240 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 BUB1O43683 1085 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 KDELR3O43731 214 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 SKILP12757 684 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 PSMA2P25787 234 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 ARRB1P49407 418 aaPredicted RBP16.17■□□□□ 0.18
CDK4-215ENST00000553237 NEK3P51956 506 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 GEMIN4P57678 1058 aaKnown RBP16.17■□□□□ 0.18
CDK4-215ENST00000553237 FANCCQ00597 558 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 NR1I3Q14994 352 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 INAVAQ3KP66 663 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 FBXL19Q6PCT2 694 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 TMC6Q7Z403 805 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 EID2Q8N6I1 236 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 KDF1Q8NAX2 398 aaPredicted RBP16.17■□□□□ 0.18
CDK4-215ENST00000553237 ISG20Q96AZ6 181 aaKnown RBP16.17■□□□□ 0.18
CDK4-215ENST00000553237 KLHDC7BQ96G42 594 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 VCPIP1Q96JH7 1222 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 EPAS1Q99814 870 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 PARVAQ9NVD7 372 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 AIPL1Q9NZN9 384 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 FTSJ1Q9UET6 329 aa16.17■□□□□ 0.18
CDK4-215ENST00000553237 RASA4BC9J798 803 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 KRIT1O00522 736 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.188e-17■■■■□ 25.6
CDK4-215ENST00000553237 RASA4O43374 803 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 MAGEC1O60732 1142 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 FTLP02792 175 aaPredicted RBP16.16■□□□□ 0.18
CDK4-215ENST00000553237 ADRB3P13945 408 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 DESP17661 470 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 ITGB7P26010 798 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 EPHA8P29322 1005 aaPredicted RBP16.16■□□□□ 0.18
CDK4-215ENST00000553237 AKT2P31751 481 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 CLDN2P57739 230 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 SNRPD1P62314 119 aaKnown RBP16.16■□□□□ 0.18
CDK4-215ENST00000553237 KLHL30Q0D2K2 578 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 OVGP1Q12889 678 aa16.16■□□□□ 0.18
CDK4-215ENST00000553237 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms