RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 SLC47A2Q86VL8 602 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ZDHHC17Q8IUH5 632 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 SLC22A18ASQ8N1D0 253 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ATP11CQ8NB49 1132 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ARRDC3Q96B67 414 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 HIC2Q96JB3 615 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 NPY6RQ99463 290 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 NLGN3Q9NZ94 848 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ZFR2Q9UPR6 939 aaKnown RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 HS3ST3A1Q9Y663 406 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 NYNRINQ9P2P1 1898 aaKnown RBP12.1□□□□□ -0.47
CKAP4-202ENST00000552828 IGLV3-10A0A075B6K4 115 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 LY6G6EA0A0G2JKS1 128 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 RNF103O00237 685 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
CKAP4-202ENST00000552828 SCAMP1O15126 338 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 EPHB6O15197 1021 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 OPA1O60313 960 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 SNAP91O60641 907 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF821O75541 412 aaPredicted RBP12.1□□□□□ -0.47
CKAP4-202ENST00000552828 CYP11B1P15538 503 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 RRM1P23921 792 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 SOX5P35711 763 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 GGCXP38435 758 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 JAM2P57087 298 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 DAB2P98082 770 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 PTPN20Q4JDL3 420 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 PCSK4Q6UW60 755 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 GCNT7Q6ZNI0 430 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
CKAP4-202ENST00000552828 PASD1Q8IV76 773 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 DCAF4L2Q8NA75 395 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
CKAP4-202ENST00000552828 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 SIK2Q9H0K1 926 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 U3KQA8 63 aa12.1□□□□□ -0.47
CKAP4-202ENST00000552828 A0A0D9SEW6 157 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ILVBLA1L0T0 632 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 NEMP2A6NFY4 417 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
CKAP4-202ENST00000552828 BNIP3LO60238 219 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ZMPSTE24O75844 475 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 GFPT2O94808 682 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 F9P00740 461 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 TPM3P06753 285 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 RHOCP08134 193 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ALPPL2P10696 532 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
CKAP4-202ENST00000552828 SCNN1AP37088 669 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 GABRB2P47870 512 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 LSSP48449 732 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 CCDC173Q0VFZ6 552 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 Q6ZSR6 202 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 LSMEM2Q8N112 164 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF843Q8N446 348 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF248Q8NDW4 579 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 KLK6Q92876 244 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 BMFQ96LC9 184 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 APOLD1Q96LR9 279 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 DEPDC7Q96QD5 511 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 CALN1Q9BXU9 219 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 FZD3Q9NPG1 666 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 DYRK4Q9NR20 520 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
CKAP4-202ENST00000552828 SPTY2D1-AS1A0A0U1RR47 76 aa12.08□□□□□ -0.48
CKAP4-202ENST00000552828 CXorf51AA0A1B0GTR3 108 aa12.08□□□□□ -0.48
CKAP4-202ENST00000552828 A6NNZ2 444 aa12.08□□□□□ -0.48
CKAP4-202ENST00000552828 K7ESM1 405 aa12.08□□□□□ -0.48
CKAP4-202ENST00000552828 FFAR2O15552 330 aa12.08□□□□□ -0.48
CKAP4-202ENST00000552828 AP1G1O43747 822 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms