RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 IGF2-ASQ6U949 168 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 TFAP2DQ7Z6R9 452 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 ERICH1Q86X53 443 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 OR7D4Q8NG98 312 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 FGF11Q92914 225 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 RAB7BQ96AH8 199 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 DUSP23Q9BVJ7 150 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 UCKL1Q9NWZ5 548 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 DAAM1Q9Y4D1 1078 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 CSNK1G3Q9Y6M4 447 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 U3KQA8 63 aa16.44■□□□□ 0.22
CALCOCO1-220ENST00000552282 SPTY2D1-AS1A0A0U1RR47 76 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 NEMP2A6NFY4 417 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 SCAMP1O15126 338 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 RRP8O43159 456 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 ALPPL2P10696 532 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 NME1P15531 152 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 FGL2Q14314 439 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 CAMK4Q16566 473 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 ARSIQ5FYB1 569 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 SEL1L3Q68CR1 1132 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 LINGO4Q6UY18 593 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 NLRP14Q86W24 1093 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 CRELD1Q96HD1 420 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 BMFQ96LC9 184 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 TBATAQ96M53 351 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 HEPHQ9BQS7 1158 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 C1QTNF2Q9BXJ5 285 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 STK33Q9BYT3 514 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 OSBPL2Q9H1P3 480 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 TMPRSS4Q9NRS4 437 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 SNX10Q9Y5X0 201 aa16.43■□□□□ 0.22
CALCOCO1-220ENST00000552282 ATXN7O15265 892 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 BNIP3LO60238 219 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 BRINP1O60477 761 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 MT-CO3P00414 261 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CSF2P04141 144 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 MMP8P22894 467 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 ITPKBP27987 946 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 ACTN2P35609 894 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 RABIFP47224 123 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 GEMIN4P57678 1058 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 RNASE9P60153 205 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 SEMG2Q02383 582 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 TPD52L1Q16890 204 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 DPCR1Q3MIW9 517 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 LRRC69Q6ZNQ3 347 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 PARS2Q7L3T8 475 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 STRADAQ7RTN6 431 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 PARGQ86W56 976 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 GRIN3AQ8TCU5 1115 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 HIC2Q96JB3 615 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 KLF6Q99612 283 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 CALN1Q9BXU9 219 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 SLC17A9Q9BYT1 436 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 TNKS2Q9H2K2 1166 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 ATP13A1Q9HD20 1204 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 FZD3Q9NPG1 666 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 EVA1BQ9NVM1 165 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 TMEM248Q9NWD8 314 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 NCKIPSDQ9NZQ3 722 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 NOCTQ9UK39 431 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 AK5Q9Y6K8 562 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 TDRD6O60522 2096 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 SHROOM3Q8TF72 1996 aa16.42■□□□□ 0.22
CALCOCO1-220ENST00000552282 TSPAN6O43657 245 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 OPA1O60313 960 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 PCDH8O95206 1070 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 GSRP00390 522 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 RHOQP17081 205 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 PTPN9P43378 593 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 DUSP3P51452 185 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 PFN3P60673 137 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 DAB2P98082 770 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 RAPGEF1Q13905 1077 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 FZD2Q14332 565 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 ZCCHC8Q6NZY4 707 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 Q6ZSR6 202 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 FAM131BQ86XD5 332 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 CENPIQ92674 756 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 FEM1CQ96JP0 617 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 APOLD1Q96LR9 279 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 ZNF578Q96N58 590 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 DCBLD2Q96PD2 775 aa16.41■□□□□ 0.22
CALCOCO1-220ENST00000552282 GANQ9H2C0 597 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms