RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TNK2Q07912 1038 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 SLC10A7Q0GE19 358 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 RIPK1Q13546 671 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 SNCBQ16143 134 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 USP41Q3LFD5 358 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 NADSYN1Q6IA69 706 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 CLEC14AQ86T13 490 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 ZC3HC1Q86WB0 502 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 CNTN4Q8IWV2 1026 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 PLD6Q8N2A8 252 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 ACVR1CQ8NER5 493 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 PSMG2Q969U7 264 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 CEP295NLQ96MC4 621 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 KLHL5Q96PQ7 755 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 GPR22Q99680 433 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 TUBB6Q9BUF5 446 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 RHOJQ9H4E5 214 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 COPG2Q9UBF2 871 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 HBS1LQ9Y450 684 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 MIA3Q5JRA6 1907 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 MICAL3Q7RTP6 2002 aa14.21□□□□□ -0.13
RAB3IP-216ENST00000552199 TRAFD1O14545 582 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 RAMP2O60895 175 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 HAUS5O94927 633 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 VAPBO95292 243 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 SERPINE1P05121 402 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 C2P06681 752 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 TACR2P21452 398 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 CHRNA4P43681 627 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ALDH7A1P49419 539 aaKnown RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 CSRP3P50461 194 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 RASSF2P50749 326 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ATN1P54259 1190 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 IL10RBQ08334 325 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ITKQ08881 620 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 GRM3Q14832 879 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 DLG2Q15700 870 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 PCSK7Q16549 785 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 PARP15Q460N3 678 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ARMC3Q5W041 872 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ANKRD33Q7Z3H0 272 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 CIR1Q86X95 450 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 C10orf107Q8IVU9 208 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 SUGP1Q8IWZ8 645 aaKnown RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 NSMCE1Q8WV22 266 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 MYEOVQ96EZ4 313 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 TMEM237Q96Q45 408 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 RAB3IPQ96QF0 476 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 CDK5RAP1Q96SZ6 601 aaKnown RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ATXN3LQ9H3M9 355 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 FBXO6Q9NRD1 293 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 VPS45Q9NRW7 570 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 TREX1Q9NSU2 369 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 SAGE1Q9NXZ1 904 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 BACE2Q9Y5Z0 518 aa14.21□□□□□ -0.14
RAB3IP-216ENST00000552199 ITM2AO43736 263 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 HNRNPCL1O60812 293 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 SIN3BO75182 1162 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 UPP2O95045 317 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 ATP6V1G2O95670 118 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 AHSGP02765 367 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 MMP2P08253 660 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 KITP10721 976 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 CPA3P15088 417 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 GRK2P25098 689 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 ARNTP27540 789 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 GABRB3P28472 473 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 OR1D2P34982 312 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 CD86P42081 329 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC1A6P48664 564 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 MAPKAPK2P49137 400 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 TUFMP49411 452 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 KCNQ1P51787 676 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 YBEYP58557 167 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 MAXP61244 160 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 IRF9Q00978 393 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 SERINC3Q13530 473 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 UGP2Q16851 508 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF354CQ86Y25 554 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 PRKD2Q9BZL6 878 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 CWH43Q9H720 699 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 LNPEPQ9UIQ6 1025 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 DNMT3LQ9UJW3 386 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC39A10Q9ULF5 831 aa14.2□□□□□ -0.14
RAB3IP-216ENST00000552199 FCHO1O14526 889 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PAMP19021 973 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 OR1E1P30953 314 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 ATP5C1P36542 298 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 AQP5P55064 265 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 DSC2Q02487 901 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms