RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ZNF212Q9UDV6 495 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 IGLV3-10A0A075B6K4 115 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 SCAMP1O15126 338 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 USP12O75317 370 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 FGFR1OPO95684 399 aaKnown RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 GP1BAP07359 652 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ALPPL2P10696 532 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ADRB3P13945 408 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 OR1E1P30953 314 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 KRT9P35527 623 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 SERPINH1P50454 418 aaKnown RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 NEK3P51956 506 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 CCDC15Q0P6D6 951 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 FZD2Q14332 565 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 TPRG1LQ5T0D9 272 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 TRNP1Q6NT89 227 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 KYAT3Q6YP21 454 aaKnown RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF548Q8NEK5 533 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 PGAP3Q96FM1 320 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 IFT43Q96FT9 208 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF578Q96N58 590 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-222ENST00000550274 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 SLC17A9Q9BYT1 436 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 OSBPL2Q9H1P3 480 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 CPNE5Q9HCH3 593 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ASCL3Q9NQ33 180 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 ACTL7AQ9Y615 435 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 MAST4O15021 2626 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
LETMD1-222ENST00000550274 A0A1W2PNU3 283 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 GTPBP10A4D1E9 387 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 PAK4O96013 591 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 NME1P15531 152 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 ITGB7P26010 798 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 FLT3P36888 993 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 RECQLP46063 649 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 LSSP48449 732 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 HNRNPKP61978 463 aaKnown RBP eCLIP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 ARF5P84085 180 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 KIAA1161Q6NSJ0 714 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 LRRC31Q6UY01 552 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 PARS2Q7L3T8 475 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 ZDHHC17Q8IUH5 632 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 IFI44Q8TCB0 444 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 PPP1R16AQ96I34 528 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 SPON2Q9BUD6 331 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 RWDD2AQ9UIY3 292 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 FCF1Q9Y324 198 aaKnown RBP12.83□□□□□ -0.36
LETMD1-222ENST00000550274 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 HS3ST3A1Q9Y663 406 aa12.83□□□□□ -0.36
LETMD1-222ENST00000550274 AHCTF1Q8WYP5 2266 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ILVBLA1L0T0 632 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 SPINT1O43278 529 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 LZTS3O60299 673 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 SRGAP2O75044 1071 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CD160O95971 181 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CSF2P04141 144 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 TGM2P21980 687 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 L1CAMP32004 1257 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 GKP32189 559 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CDH5P33151 784 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ABL2P42684 1182 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 SNX16P57768 344 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CFHR1Q03591 330 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 CDKN3Q16667 212 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 SLC25A52Q3SY17 297 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 FAM102AQ5T9C2 384 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ARHGAP40Q5TG30 622 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 DPY19L2P1Q6NXN4 242 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 GUSBP11Q6P575 273 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 BNIPLQ7Z465 357 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 PARGQ86W56 976 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 XYLT1Q86Y38 959 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 DCP2Q8IU60 420 aaKnown RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 FAM71AQ8IYT1 594 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 LSMEM2Q8N112 164 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 PCDH20Q8N6Y1 951 aaKnown RBP12.82□□□□□ -0.36
LETMD1-222ENST00000550274 FAM174AQ8TBP5 190 aa12.82□□□□□ -0.36
LETMD1-222ENST00000550274 MAPK15Q8TD08 544 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms