RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PRPF39Q86UA1 669 aaKnown RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 MON1AQ86VX9 555 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 CALML4Q96GE6 196 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 PRR11Q96HE9 360 aaPredicted RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 NAP1L5Q96NT1 182 aaPredicted RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 DPCDQ9BVM2 203 aaPredicted RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 GLOD4Q9HC38 313 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 CD320Q9NPF0 282 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 INTS13Q9NVM9 706 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 CORO1CQ9ULV4 474 aaPredicted RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 COPG1Q9Y678 874 aaKnown RBP6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 AOX1Q06278 1338 aa6.56□□□□□ -1.36
TGFBR1-208ENST00000550253 SPARCP09486 303 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 CLTBP09497 229 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ARSAP15289 507 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 UFM1P61960 85 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 FKBP1BP68106 108 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 DEUP1Q05D60 604 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 STK4Q13043 487 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 CBFBQ13951 182 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 NAA25Q14CX7 972 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 MAVSQ7Z434 540 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 GDF7Q7Z4P5 450 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 P3H2Q8IVL5 708 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 CCDC105Q8IYK2 499 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 TNIP2Q8NFZ5 429 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 GLMPQ8WWB7 406 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 KIF1BPQ96EK5 621 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 BOD1Q96IK1 185 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 VPS50Q96JG6 964 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 SAP30LQ9HAJ7 183 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 SLC22A11Q9NSA0 550 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 TMEM74BQ9NUR3 256 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 DBF4Q9UBU7 674 aaPredicted RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 FPGT-TNNI3KV9GXZ4 949 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 FAM170AA1A519 330 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 TCAF2A6NFQ2 919 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 GRXCR1A8MXD5 290 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 GOLGA6L6A8MZA4 724 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 AHRRA9YTQ3 701 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PSMD9O00233 223 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 SYN3O14994 580 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PMPCBO75439 489 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 METTL18O95568 372 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PPP3CBP16298 524 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 NFKBIAP25963 317 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 AVPR2P30518 371 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ABCD1P33897 745 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 IGHMBP2P38935 993 aaKnown RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ARL1P40616 181 aaPredicted RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 SNX16P57768 344 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 RASA2Q15283 850 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PKN2Q16513 984 aaKnown RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 RUNDC3AQ59EK9 446 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 TCTN3Q6NUS6 607 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 FBXO46Q6PJ61 603 aaPredicted RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 Q6ZRM9 215 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ULK2Q8IYT8 1036 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 WDTC1Q8N5D0 677 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 BEND2Q8NDZ0 799 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 SCFD2Q8WU76 684 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ZBED3Q96IU2 234 aaPredicted RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 CLMNQ96JQ2 1002 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 PIP5K1AQ99755 562 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 GPR87Q9BY21 358 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 FTOQ9C0B1 505 aaKnown RBP eCLIP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 MTMR4Q9NYA4 1195 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 EIF2B4Q9UI10 523 aaKnown RBP6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 ZNF711Q9Y462 761 aa6.55□□□□□ -1.36
TGFBR1-208ENST00000550253 MED23Q9ULK4 1368 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 XDHP47989 1333 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 NPIPB13A6NJU9 1138 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 MARCH11A6NNE9 402 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 NPIPB5A8MRT5 1133 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 NPIPB4C9JG80 1138 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 PCCAP05165 728 aaPredicted RBP6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 HOXB7P09629 217 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 ZNF853P0CG23 659 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 ADRA1DP25100 572 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 GKP32189 559 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 HNF1BP35680 557 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 LIPAP38571 399 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 NNMTP40261 264 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 VAV2P52735 878 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 RPL7AP62424 266 aaKnown RBP6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 CALD1Q05682 793 aaKnown RBP6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 TAF11Q15544 211 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 SLC9B1Q4ZJI4 515 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 SH2D4BQ5SQS7 431 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 WDR93Q6P2C0 686 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 CYP20A1Q6UW02 462 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 MAMDC4Q6UXC1 1216 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 OR52L2PQ8NGH6 319 aa6.54□□□□□ -1.36
TGFBR1-208ENST00000550253 R3HDM4Q96D70 268 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms