RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 GMIPQ9P107 970 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 UBDO15205 165 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 SEPT4O43236 478 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 CYBBP04839 570 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 RAB10P61026 200 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 PDE1CQ14123 709 aaPredicted RBP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 C6orf10Q5SRN2 563 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 FSTL4Q6MZW2 842 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 CAND1Q86VP6 1230 aaKnown RBP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 EXOC2Q96KP1 924 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 MRPL46Q9H2W6 279 aaKnown RBP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 ALG9Q9H6U8 611 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 AKAP10O43572 662 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 SOAT2O75908 522 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 NMBRP28336 390 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATXN2-219ENST00000550104 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 SMOQ99835 787 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 SH3GL3Q99963 347 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 CRTAC1Q9NQ79 661 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
ATXN2-219ENST00000550104 GSC2O15499 205 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 VPS26AO75436 327 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TGDSO95455 350 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 GLUD2P49448 558 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 RHOAP61586 193 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 POU4F1Q01851 419 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 PKN3Q6P5Z2 889 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 FGD4Q96M96 766 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 ZNF358Q9NW07 568 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 UXTQ9UBK9 157 aaPredicted RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TYROBPO43914 113 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TOP3BO95985 862 aaKnown RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 PTK2BQ14289 1009 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 LCA5Q86VQ0 697 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 IGSF9Q9P2J2 1179 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TPBGLP0DKB5 382 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 VAV1P15498 845 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 PRKCZQ05513 592 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 SLC10A2Q12908 348 aaPredicted RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TAF10Q12962 218 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 GRM3Q14832 879 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 CYTH1Q15438 398 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 SGO1Q5FBB7 561 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 POTEHQ6S545 545 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 RBBP8Q99708 897 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 E9PAM4 449 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TLR5O60602 858 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 FKBP6O75344 327 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TSPAN8P19075 237 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 ATP5C1P36542 298 aaKnown RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 SLC18A1P54219 525 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 RIPK1Q13546 671 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 MARK2Q7KZI7 788 aaKnown RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 CFAP52Q8N1V2 620 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 DDI1Q8WTU0 396 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 IRGQQ8WZA9 623 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
ATXN2-219ENST00000550104 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 CDRT15Q96T59 188 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 NPY6RQ99463 290 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■□□□ 13.6
ATXN2-219ENST00000550104 VTI1BQ9UEU0 232 aa17.09■□□□□ 0.33
ATXN2-219ENST00000550104 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.33
ATXN2-219ENST00000550104 TPST1O60507 370 aa17.08■□□□□ 0.33
ATXN2-219ENST00000550104 LIMK2P53671 638 aa17.08■□□□□ 0.33
ATXN2-219ENST00000550104 HDAC10Q969S8 669 aa17.08■□□□□ 0.33
ATXN2-219ENST00000550104 TEKT5Q96M29 485 aa17.08■□□□□ 0.33
ATXN2-219ENST00000550104 WDR55Q9H6Y2 383 aaPredicted RBP17.08■□□□□ 0.33
ATXN2-219ENST00000550104 UBA2Q9UBT2 640 aaPredicted RBP17.08■□□□□ 0.33
ATXN2-219ENST00000550104 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■■ 94.5
ATXN2-219ENST00000550104 ABLIM1O14639 778 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 HNRNPLP14866 589 aaKnown RBP eCLIP17.08■□□□□ 0.324e-8■■■■□ 25.4
ATXN2-219ENST00000550104 EEF1B2P24534 225 aaKnown RBP17.08■□□□□ 0.32
ATXN2-219ENST00000550104 PKNOX1P55347 436 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 DUSP4Q13115 394 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 SPRED3Q2MJR0 410 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 IFNL1Q8IU54 200 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 SLC22A9Q8IVM8 553 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 CLPTM1LQ96KA5 538 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 ARHGEF3Q9NR81 526 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 CCDC167Q9P0B6 97 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 CRLS1Q9UJA2 301 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 PLA2G4CQ9UP65 541 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 USP1O94782 785 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
ATXN2-219ENST00000550104 NNMTP40261 264 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 PRKAA2P54646 552 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 MPP1Q00013 466 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 RBM15BQ8NDT2 890 aaKnown RBP17.08■□□□□ 0.32
ATXN2-219ENST00000550104 CEP70Q8NHQ1 597 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
ATXN2-219ENST00000550104 SYTL2Q9HCH5 934 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms