RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 LMAN1P49257 510 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 GEMP55040 296 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 ECT2LQ008S8 904 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 NSUN2Q08J23 767 aaKnown RBP eCLIP17.68■□□□□ 0.42
LETMD1-220ENST00000549686 KCNJ11Q14654 390 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 ZDHHC24Q6UX98 284 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 C12orf40Q86WS4 652 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 SLC44A3Q8N4M1 653 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 NAT8LQ8N9F0 302 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 KDM1BQ8NB78 822 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 MCUQ8NE86 351 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 ISG20Q96AZ6 181 aaKnown RBP17.68■□□□□ 0.42
LETMD1-220ENST00000549686 MSANTD3Q96H12 275 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 FMO2Q99518 471 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 HINFPQ9BQA5 517 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 PHACTR1Q9C0D0 580 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 C8orf33Q9H7E9 229 aaPredicted RBP17.68■□□□□ 0.42
LETMD1-220ENST00000549686 PRKAG3Q9UGI9 489 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 NFU1Q9UMS0 254 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 SLC8A2Q9UPR5 921 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 TTLL3Q9Y4R7 772 aa17.68■□□□□ 0.42
LETMD1-220ENST00000549686 NUP205Q92621 2012 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 LOC730098B7Z3J9 87 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 AP3B1O00203 1094 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 CD160O95971 181 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 APRTP07741 180 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 GLULP15104 373 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 MPP3Q13368 585 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 CYTH1Q15438 398 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 TRADDQ15628 312 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 EMBQ6PCB8 327 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 TERB1Q8NA31 727 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 FBXO25Q8TCJ0 367 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 UCMAQ8WVF2 138 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 PRCCQ92733 491 aaPredicted RBP17.67■□□□□ 0.42
LETMD1-220ENST00000549686 IMP4Q96G21 291 aaKnown RBP17.67■□□□□ 0.42
LETMD1-220ENST00000549686 LRRC40Q9H9A6 602 aa17.67■□□□□ 0.42
LETMD1-220ENST00000549686 SUN1O94901 812 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 AP2A1O95782 977 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 DLDP09622 509 aaKnown RBP17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ECHS1P30084 290 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 OPRD1P41143 372 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 GRIA2P42262 883 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 CSNK1DP48730 415 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 RHOAP61586 193 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ITKQ08881 620 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 LINGO4Q6UY18 593 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 LEKR1Q6ZMV7 388 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 LINC00523Q86TU6 105 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 PLPP6Q8IY26 295 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 PHTF2Q8N3S3 785 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ZCCHC9Q8N567 271 aaKnown RBP17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ATP11CQ8NB49 1132 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 HNRNPLLQ8WVV9 542 aaKnown RBP17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ZNF419Q96HQ0 510 aaPredicted RBP17.66■□□□□ 0.42
LETMD1-220ENST00000549686 NUDCD1Q96RS6 583 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 XAB2Q9HCS7 855 aaKnown RBP17.66■□□□□ 0.42
LETMD1-220ENST00000549686 ELOVL2Q9NXB9 296 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
LETMD1-220ENST00000549686 NYNRINQ9P2P1 1898 aaKnown RBP17.65■□□□□ 0.42
LETMD1-220ENST00000549686 DYNC1I1O14576 645 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 TP73O15350 636 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 APODP05090 189 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 MLNP12872 115 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 CR2P20023 1033 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 SLC6A11P48066 632 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 ST8SIA6P61647 398 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 AP1S1P61966 158 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 CBLBQ13191 982 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 FAXCQ5TGI0 409 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 NAPEPLDQ6IQ20 393 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 RALGPS2Q86X27 583 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-220ENST00000549686 PGBD5Q8N414 524 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 SH2D3CQ8N5H7 860 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 PCDH20Q8N6Y1 951 aaKnown RBP17.65■□□□□ 0.42
LETMD1-220ENST00000549686 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
LETMD1-220ENST00000549686 SEMA3CQ99985 751 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 CIPCQ9C0C6 399 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 SLC2A4RGQ9NR83 387 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 LHX3Q9UBR4 397 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 ERVW-1Q9UQF0 538 aa17.65■□□□□ 0.42
LETMD1-220ENST00000549686 TBC1D3BA6NDS4 549 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 NPC1O15118 1278 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 EIF3HO15372 352 aaKnown RBP eCLIP17.64■□□□□ 0.41
LETMD1-220ENST00000549686 INSIG1O15503 277 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 ATP9BO43861 1147 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 KAT7O95251 611 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 IGSF6O95976 241 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 GSRP00390 522 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 MT-CO1P00395 513 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 SERPINF2P08697 491 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 SRCP12931 536 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 IL9P15248 144 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 CA4P22748 312 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 TNNT3P45378 269 aaPredicted RBP17.64■□□□□ 0.41
LETMD1-220ENST00000549686 ARL4CP56559 192 aa17.64■□□□□ 0.41
LETMD1-220ENST00000549686 SNRPD1P62314 119 aaKnown RBP17.64■□□□□ 0.41
LETMD1-220ENST00000549686 TDGQ13569 410 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms