RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 GRIN3AQ8TCU5 1115 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 SLC39A7Q92504 469 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 KLK6Q92876 244 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 ISG20Q96AZ6 181 aaKnown RBP13.12□□□□□ -0.31
PTCH1-218ENST00000548945 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 ZNF578Q96N58 590 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-218ENST00000548945 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-218ENST00000548945 DEPDC7Q96QD5 511 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 TBCBQ99426 244 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 MYOCQ99972 504 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 MPP6Q9NZW5 540 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
PTCH1-218ENST00000548945 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 WASF2Q9Y6W5 498 aa13.12□□□□□ -0.31
PTCH1-218ENST00000548945 FFAR2O15552 330 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 CSF2P04141 144 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 ADRB3P13945 408 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 CYP11B1P15538 503 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 L1CAMP32004 1257 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 ETFBP38117 255 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 CLDN2P57739 230 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 SEL1L3Q68CR1 1132 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 Q6ZSR6 202 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 GPR155Q7Z3F1 870 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 XYLT1Q86Y38 959 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 ZNF248Q8NDW4 579 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 RAB7BQ96AH8 199 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-218ENST00000548945 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 ZYG11BQ9C0D3 744 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 PDCL3Q9H2J4 239 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 PLCB1Q9NQ66 1216 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 RAI2Q9Y5P3 530 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 SNX10Q9Y5X0 201 aa13.11□□□□□ -0.31
PTCH1-218ENST00000548945 COL27A1Q8IZC6 1860 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 SPTY2D1-AS1A0A0U1RR47 76 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 H3BM21 787 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 K7ESM1 405 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 RNF103O00237 685 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 ENDOD1O94919 500 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 NME1P15531 152 aaKnown RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 FLT3P36888 993 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 RABIFP47224 123 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 LSSP48449 732 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 CCNHP51946 323 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 UCNP55089 124 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 PCBP4P57723 403 aaKnown RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 ERVPABLB-1P60509 514 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 GNA12Q03113 381 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 CARD16Q5EG05 197 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 PTAR1Q7Z6K3 402 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-218ENST00000548945 PARGQ86W56 976 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 SPACA3Q8IXA5 215 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 ASB12Q8WXK4 309 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 HIC2Q96JB3 615 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 BMFQ96LC9 184 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 SPON2Q9BUD6 331 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 ATP13A1Q9HD20 1204 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 DNAJC28Q9NX36 388 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 TMEM59LQ9UK28 342 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 FADS3Q9Y5Q0 445 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 U3KQA8 63 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 KIF26BQ2KJY2 2108 aa13.1□□□□□ -0.31
PTCH1-218ENST00000548945 AHCTF1Q8WYP5 2266 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 POM121BA6NF01 834 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 TSPAN6O43657 245 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 SRGAP2O75044 1071 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
PTCH1-218ENST00000548945 UBE2HP62256 183 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 ARF5P84085 180 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 SGCGQ13326 291 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 FGL2Q14314 439 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 FZD2Q14332 565 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 VWA3BQ502W6 1294 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
PTCH1-218ENST00000548945 ZNF548Q8NEK5 533 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-218ENST00000548945 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms