RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 GPATCH8Q9UKJ3 1502 aaKnown RBP4.31□□□□□ -1.72
CNOT2-216ENST00000548939 RALGAPBQ86X10 1494 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 PTCH1Q13635 1447 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 TCRBV7S3A2A0A539 114 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 HNRNPDLO14979 420 aaKnown RBP4.31□□□□□ -1.72
CNOT2-216ENST00000548939 NCK2O43639 380 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 KCNJ13O60928 360 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 KRT36O76013 467 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 SNRNP70P08621 437 aaKnown RBP4.31□□□□□ -1.72
CNOT2-216ENST00000548939 KLRK1P26718 216 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 AKT1P31749 480 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 PPP3CCP48454 512 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 AMTP48728 403 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 CYP2J2P51589 502 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 RNASELQ05823 741 aaKnown RBP4.31□□□□□ -1.72
CNOT2-216ENST00000548939 TRAF3Q13114 568 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 RAB30Q15771 203 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 HEPHL1Q6MZM0 1159 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 SLC30A9Q6PML9 568 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 UNC5CLQ8IV45 518 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 HORMAD2Q8N7B1 307 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 ZNF333Q96JL9 665 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 FIZ1Q96SL8 496 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 HIPK3Q9H422 1215 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 TM7SF3Q9NS93 570 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 OCIAD1Q9NX40 245 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 PKP3Q9Y446 797 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 MROH1Q8NDA8 1641 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 EFCAB6Q5THR3 1501 aa4.31□□□□□ -1.72
CNOT2-216ENST00000548939 ARHGAP35Q9NRY4 1499 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 NCOA3Q9Y6Q9 1424 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 TET3O43151 1660 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 KIF28PB7ZC32 967 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 LDB2O43679 373 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 UMODP07911 640 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 GNLYP22749 145 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 TNFSF4P23510 183 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 PLK5Q496M5 336 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 COBLL1Q53SF7 1204 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 PALB2Q86YC2 1186 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 NRSN1Q8IZ57 195 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
CNOT2-216ENST00000548939 TCP11L2Q8N4U5 519 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 SLC35F5Q8WV83 523 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 IGSF21Q96ID5 467 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 TCF7L2Q9NQB0 619 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 ZDHHC7Q9NXF8 308 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 PIK3C2BO00750 1634 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 CCDC18Q5T9S5 1454 aa4.3□□□□□ -1.72
CNOT2-216ENST00000548939 BUB3O43684 328 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 CGAP01215 116 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 MYZAPP0CAP1 466 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 UNGP13051 313 aaPredicted RBP4.29□□□□□ -1.72
CNOT2-216ENST00000548939 NPPBP16860 134 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 NAGAP17050 411 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 PRELPP51888 382 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 TUBA1BP68363 451 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 IDI1Q13907 227 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 ZNF284Q2VY69 593 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 FAM171A1Q5VUB5 890 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 MECRQ9BV79 373 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 SRPRBQ9Y5M8 271 aaKnown RBP4.29□□□□□ -1.72
CNOT2-216ENST00000548939 RAI2Q9Y5P3 530 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 MST1RQ04912 1400 aa4.29□□□□□ -1.72
CNOT2-216ENST00000548939 CHD2O14647 1828 aaKnown RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 GLI3P10071 1580 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 PIP5K1BO14986 540 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 TMCC1O94876 653 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 SOX30O94993 753 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 IGLV2-11P01706 119 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 TSPY4P0CV99 314 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 TSPY10P0CW01 314 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 HOXB9P17482 250 aaPredicted RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 THPOP40225 353 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 GRSF1Q12849 480 aaKnown RBP eCLIP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 SF3A3Q12874 501 aaKnown RBP eCLIP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 ZRSR1Q15695 479 aaKnown RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 ATG9BQ674R7 924 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 RFLNBQ8N5W9 214 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 ENDOVQ8N8Q3 282 aaKnown RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 MIGA1Q8NAN2 632 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 IPO4Q8TEX9 1081 aaKnown RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 GFM1Q96RP9 751 aaKnown RBP4.28□□□□□ -1.72
CNOT2-216ENST00000548939 NODALQ96S42 347 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 IL25Q9H293 177 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 CEP152O94986 1710 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 LRRIQ1Q96JM4 1722 aa4.28□□□□□ -1.72
CNOT2-216ENST00000548939 CHD4Q14839 1912 aa4.27□□□□□ -1.73
CNOT2-216ENST00000548939 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
CNOT2-216ENST00000548939 SLC38A8A6NNN8 435 aa4.27□□□□□ -1.73
CNOT2-216ENST00000548939 PMM2O15305 246 aa4.27□□□□□ -1.73
CNOT2-216ENST00000548939 LARGE1O95461 756 aa4.27□□□□□ -1.73
CNOT2-216ENST00000548939 F7P08709 466 aaPredicted RBP4.27□□□□□ -1.73
CNOT2-216ENST00000548939 DAOP14920 347 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms