RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 PAK1Q13153 545 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 PDE1CQ14123 709 aaPredicted RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 SPIDRQ14159 915 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 POLD3Q15054 466 aaPredicted RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 CDKN3Q16667 212 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ARHGAP44Q17R89 818 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 GCNT7Q6ZNI0 430 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 EFL1Q7Z2Z2 1120 aaKnown RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ELOA2Q8IYF1 753 aaPredicted RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 RYBPQ8N488 228 aaPredicted RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 PCDH20Q8N6Y1 951 aaKnown RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 DENND6BQ8NEG7 585 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 WDR36Q8NI36 951 aaKnown RBP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 SPATA20Q8TB22 786 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 LMX1AQ8TE12 382 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 RAB7BQ96AH8 199 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ALG14Q96F25 216 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 KREMEN1Q96MU8 473 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ARHGAP9Q9BRR9 750 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 SPON2Q9BUD6 331 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 STRADBQ9C0K7 418 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 TKTL2Q9H0I9 626 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 SYNDIG1Q9H7V2 258 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ATP13A1Q9HD20 1204 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 PCDHGA8Q9Y5G5 932 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 TENM4Q6N022 2769 aa9.31□□□□□ -0.92
AC055716.3-201ENST00000547533 ILVBLA1L0T0 632 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 TOR1BO14657 336 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 AP1G1O43747 822 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SLC28A2O43868 658 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SNAP91O60641 907 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 GJB6O95452 261 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 PAK4O96013 591 aaPredicted RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 CTSLP07711 333 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ANXA6P08133 673 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SULT1E1P49888 294 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 INHBCP55103 352 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 RAD51Q06609 339 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 EIF3IQ13347 325 aaKnown RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 EIF4EBP2Q13542 120 aaPredicted RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 TAF5Q15542 800 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 C5orf22Q49AR2 442 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ZNF542PQ5EBM4 170 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 CARD16Q5EG05 197 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ISM2Q6H9L7 571 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 GBP6Q6ZN66 633 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 FAM183BPQ6ZVS7 135 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SLC26A9Q7LBE3 791 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 PASD1Q8IV76 773 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SLC22A18ASQ8N1D0 253 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ATL2Q8NHH9 583 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ARRDC3Q96B67 414 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 C1orf74Q96LT6 269 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 SLC46A1Q96NT5 459 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 LENG8Q96PV6 779 aaPredicted RBP9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 CPXM1Q96SM3 734 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 OSBPL1AQ9BXW6 950 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 TNKS2Q9H2K2 1166 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ZDHHC6Q9H6R6 413 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 ARHGEF38Q9NXL2 777 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 APEX2Q9UBZ4 518 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 OR51B4Q9Y5P0 310 aa9.3□□□□□ -0.92
AC055716.3-201ENST00000547533 MYO18BQ8IUG5 2567 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 CCDC187A0A096LP49 1063 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 CXorf51AA0A1B0GTR3 108 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 MUSKO15146 869 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 NEBLO76041 1014 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 ENDOD1O94919 500 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 MT-CO1P00395 513 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 ALPIP09923 528 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 SFTPCP11686 197 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 CTSEP14091 401 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 TGM2P21980 687 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 HTR1BP28222 390 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 CXCR3P49682 368 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 SERPINH1P50454 418 aaKnown RBP9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 SNRPD1P62314 119 aaKnown RBP9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 YPEL5P62699 121 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 PITX1P78337 314 aaPredicted RBP9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 LY6DQ14210 128 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 FZD2Q14332 565 aa9.29□□□□□ -0.92
AC055716.3-201ENST00000547533 TPD52L1Q16890 204 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms