RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	ZCCHC23	Q6ZST2	131 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	HORMAD1	Q86X24	394 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	PROSER1	Q86XN7	944 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	WDR49	Q8IV35	697 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	PSTK	Q8IV42	348 aa	Known RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	LGI2	Q8N0V4	545 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SVOP	Q8N4V2	548 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	MINDY1	Q8N5J2	469 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	VPS33A	Q96AX1	596 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	GLT1D1	Q96MS3	346 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SEZ6L	Q9BYH1	1024 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	HOXD1	Q9GZZ0	328 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SLA2	Q9H6Q3	261 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	NOL11	Q9H8H0	719 aa	Known RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	ZFYVE28	Q9HCC9	887 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	CCDC177	Q9NQR7	707 aa	Predicted RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SMOX	Q9NWM0	555 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.31	□□□□□ -0.76	1e-23	■■■■□ 20.8
UBC-213	ENST00000546120	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	GTF2IRD1	Q9UHL9	959 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	TLK1	Q9UKI8	766 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	NOX1	Q9Y5S8	564 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SNX5	Q9Y5X3	404 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	CNTNAP4	Q9C0A0	1308 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	PNMA8C	A0A1B0GUJ8	204 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	DHRS12	A0PJE2	317 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	FAM170A	A1A519	330 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	DPYSL4	O14531	572 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	KCNN4	O15554	427 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	GAS2	O43903	313 aa	Known RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	NDUFS2	O75306	463 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	VPS4B	O75351	444 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	TULP3	O75386	442 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	JRK	O75564	520 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	LYPLA1	O75608	230 aa	Predicted RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	BBOX1	O75936	387 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	TPPP	O94811	219 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	APOA1	P02647	267 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ALB	P02768	609 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	S100B	P04271	92 aa	Predicted RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	KRT19	P08727	400 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	PCNA	P12004	261 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	GFAP	P14136	432 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ACADSB	P45954	432 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	BAG6	P46379	1132 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	RPS9	P46781	194 aa	Known RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	GTF2I	P78347	998 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF45	Q02386	682 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	SELENBP1	Q13228	472 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	BMPR2	Q13873	1038 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	SLC9B1	Q4ZJI4	515 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	TBCEL	Q5QJ74	424 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	RBM20	Q5T481	1227 aa	Known RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	BTBD8	Q5XKL5	378 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	XKRX	Q6PP77	449 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	FAM196A	Q6ZSG2	479 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	TMEM26	Q6ZUK4	368 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	THAP5	Q7Z6K1	395 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	PELI3	Q8N2H9	469 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	PLD5	Q8N7P1	536 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	MCRS1	Q96EZ8	462 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	MYRFL	Q96LU7	910 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	RBBP8	Q99708	897 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	CIB1	Q99828	191 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ADAM33	Q9BZ11	813 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	NIF3L1	Q9GZT8	377 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	LRRC40	Q9H9A6	602 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	SMYD2	Q9NRG4	433 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	CACNA2D2	Q9NY47	1150 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	NARF	Q9UHQ1	456 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ENPP5	Q9UJA9	477 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	CNOT6	Q9ULM6	557 aa	Known RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	PCDHGB4	Q9UN71	923 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	EIF3L	Q9Y262	564 aa	Known RBP	10.3	□□□□□ -0.76
UBC-213	ENST00000546120	AP3M1	Q9Y2T2	418 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	GRIP1	Q9Y3R0	1128 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	DAGLA	Q9Y4D2	1042 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	PCDHGB5	Q9Y5G0	923 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	ST14	Q9Y5Y6	855 aa		10.3	□□□□□ -0.76
UBC-213	ENST00000546120	GREB1L	Q9C091	1923 aa	Predicted RBP	10.29	□□□□□ -0.76
UBC-213	ENST00000546120	TTC24	A2A3L6	582 aa	Predicted RBP	10.29	□□□□□ -0.76
UBC-213	ENST00000546120	GOLGA8IP	A6NC78	632 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	GOLGA8J	A6NMD2	632 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.29	□□□□□ -0.76
UBC-213	ENST00000546120		G3V2L1	256 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120		H0Y626	953 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120		M0R3G1	203 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	EIF3F	O00303	357 aa	Predicted RBP	10.29	□□□□□ -0.76
UBC-213	ENST00000546120	PSMD3	O43242	534 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	CHMP2A	O43633	222 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	DFNA5	O60443	496 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	NRP2	O60462	931 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	DAB1	O75553	588 aa		10.29	□□□□□ -0.76
UBC-213	ENST00000546120	MTRF1	O75570	445 aa	Known RBP	10.29	□□□□□ -0.76
UBC-213	ENST00000546120	RFPL2	O75678	378 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms