RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RGS5O15539 181 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 EPN2O95208 641 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 COL6A2P12110 1019 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 RPL7AP62424 266 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 TSNQ15631 228 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 CRY1Q16526 586 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 CASP12Q6UXS9 341 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 ZNF572Q7Z3I7 529 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 GAD1Q99259 594 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 UNKQ9C0B0 810 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PNMA8BQ9ULN7 279 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 AMHP03971 560 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 ANXA5P08758 320 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 ANPEPP15144 967 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PTDSS1P48651 473 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 CLK2P49760 499 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PSME3P61289 254 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PRKCQQ04759 706 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 TRAF7Q6Q0C0 670 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 CDK20Q8IZL9 346 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 C2orf49Q9BVC5 232 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 NIFKQ9BYG3 293 aaKnown RBP12.67□□□□□ -0.38
COL4A6-209ENST00000545689 CDH19Q9H159 772 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 ALG9Q9H6U8 611 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 LGALS13Q9UHV8 139 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
COL4A6-209ENST00000545689 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 TK2O00142 265 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 HS6ST1O60243 411 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ENDOD1O94919 500 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PSMB9P28065 219 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CRHR1P34998 444 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 GPR15P49685 360 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PHKG1Q16816 387 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MTSS1LQ765P7 747 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ARHGAP28Q9P2N2 729 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CCDC166P0CW27 439 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 RPL3P39023 403 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 RIPK1Q13546 671 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CYP2A13Q16696 494 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ATAD3BQ5T9A4 648 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 TTC23Q5W5X9 447 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 B3GNT6Q6ZMB0 384 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SLC44A1Q8WWI5 657 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ACE2Q9BYF1 805 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ATAD3AQ9NVI7 634 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SLIT2O94813 1529 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 USP12O75317 370 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 GUCY1B2O75343 617 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MT-CO1P00395 513 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 TYMPP19971 482 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CD86P42081 329 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CAPZA2P47755 286 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 INHBEP58166 350 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 STARD3Q14849 445 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 RTKNQ9BST9 563 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ZNF180Q9UJW8 692 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 RPS6KA6Q9UK32 745 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 BCLAF3A2AJT9 711 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MAGEC1O60732 1142 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MED26O95402 600 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PPIDQ08752 370 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PSMD5Q16401 504 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 CEP78Q5JTW2 689 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SPPL2AQ8TCT8 520 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SNX15Q9NRS6 342 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 SMNDC1O75940 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 GOT1P17174 413 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 ATP6V1C1P21283 382 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 TALDO1P37837 337 aa12.66□□□□□ -0.38
COL4A6-209ENST00000545689 MRPS22P82650 360 aaKnown RBP12.66□□□□□ -0.38
COL4A6-209ENST00000545689 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms