RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DAOAP59103 153 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 PFN3P60673 137 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 RPS21P63220 83 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 SULT2A1Q06520 285 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 EIF2S3LQ2VIR3 472 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 KRTAP21-3Q3LHN1 58 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 FAM26FQ5R3K3 315 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 TMEM164Q5U3C3 297 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 ARHGAP17Q68EM7 881 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 CXorf57Q6NSI4 855 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 SFTPA2Q8IWL1 248 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 CACNA2D3Q8IZS8 1091 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 PDILTQ8N807 584 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 OR2A12Q8NGT7 310 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 TAS1R2Q8TE23 839 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 ALG14Q96F25 216 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC13A1Q9BZW2 595 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 NIF3L1Q9GZT8 377 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 PRDM8Q9NQV8 689 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 ESPL1Q14674 2120 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 IGLON5A6NGN9 336 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 TTLL8A6PVC2 850 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 K7ERQ8 282 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 XPO1O14980 1071 aaKnown RBP15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 DDAH2O95865 285 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 FGF3P11487 239 aaPredicted RBP15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC8A3P57103 927 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 ARSIQ5FYB1 569 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 UNC5BQ8IZJ1 945 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 CCAR2Q8N163 923 aaKnown RBP15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 SIX6OS1Q8N1H7 587 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 EFCAB3Q8N7B9 438 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 GRIN3AQ8TCU5 1115 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 CLEC4CQ8WTT0 213 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 DYRK4Q9NR20 520 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 DONSONQ9NYP3 566 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC25A13Q9UJS0 675 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 GPR34Q9UPC5 381 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 DOLKQ9UPQ8 538 aa15.72■□□□□ 0.11
CLSTN3-216ENST00000545663 TACR2P21452 398 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 TXLNAP40222 546 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 VASPP50552 380 aaPredicted RBP15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 CDC20Q12834 499 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC12A1Q13621 1099 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 ARHGAP44Q17R89 818 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 EFHC2Q5JST6 749 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 ZC3H18Q86VM9 953 aaKnown RBP15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 SH2D3CQ8N5H7 860 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 RCBTB1Q8NDN9 531 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 TMIEQ8NEW7 156 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 CPT1CQ8TCG5 803 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 GPBAR1Q8TDU6 330 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 TCTN2Q96GX1 697 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC39A13Q96H72 371 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 FEM1CQ96JP0 617 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC45A3Q96JT2 553 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 FEM1AQ9BSK4 669 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 C1QTNF2Q9BXJ5 285 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 CDH19Q9H159 772 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 RDH14Q9HBH5 336 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 GGT7Q9UJ14 662 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 SRPRBQ9Y5M8 271 aaKnown RBP15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 FADS3Q9Y5Q0 445 aa15.71■□□□□ 0.11
CLSTN3-216ENST00000545663 FYNP06241 537 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 SRCP12931 536 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 RGS7P49802 495 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 THOP1P52888 689 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 NUCB2P80303 420 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 SGCGQ13326 291 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 MRPL49Q13405 166 aaKnown RBP15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 KIAA1161Q6NSJ0 714 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 ASB18Q6ZVZ8 466 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 CHSY1Q86X52 802 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 DQX1Q8TE96 717 aaKnown RBP15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 PDCD6IPQ8WUM4 868 aaKnown RBP15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 LENG8Q96PV6 779 aaPredicted RBP15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 CISHQ9NSE2 258 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 DMAC2Q9NW81 257 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 TSPAN16Q9UKR8 245 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 B3GALT1Q9Y5Z6 326 aa15.7■□□□□ 0.1
CLSTN3-216ENST00000545663 NIPBLQ6KC79 2804 aaeCLIP15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 SMAD6O43541 496 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 RAD1O60671 282 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 PDGFAP04085 211 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 CASP1P29466 404 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 GCLMP48507 274 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 IRAK1P51617 712 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 PPARDQ03181 441 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 PTK2BQ14289 1009 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 KNOP1Q1ED39 458 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 SPRED1Q7Z699 444 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 SCG3Q8WXD2 468 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms