RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 DCP2Q8IU60 420 aaKnown RBP14.4□□□□□ -0.1
DDX11-228ENST00000545115 DRC7Q8IY82 874 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 SLC22A18ASQ8N1D0 253 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 SNIP1Q8TAD8 396 aaKnown RBP14.4□□□□□ -0.1
DDX11-228ENST00000545115 CPA5Q8WXQ8 436 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 BAP1Q92560 729 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 BBC3Q96PG8 261 aaPredicted RBP14.4□□□□□ -0.1
DDX11-228ENST00000545115 SLC17A9Q9BYT1 436 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 STK33Q9BYT3 514 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 METTL5Q9NRN9 209 aaKnown RBP14.4□□□□□ -0.1
DDX11-228ENST00000545115 HS3ST3A1Q9Y663 406 aa14.4□□□□□ -0.1
DDX11-228ENST00000545115 NBEAQ8NFP9 2946 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 MT-CO3P00414 261 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 CKMT1AP12532 417 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 EEF1GP26641 437 aaKnown RBP14.39□□□□□ -0.11
DDX11-228ENST00000545115 ITPKBP27987 946 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 L1CAMP32004 1257 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 DNA2P51530 1060 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 HNRNPKP61978 463 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX11-228ENST00000545115 ATP11AP98196 1134 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
DDX11-228ENST00000545115 ARL13BQ3SXY8 428 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 CARD16Q5EG05 197 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
DDX11-228ENST00000545115 KDM7AQ6ZMT4 941 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 Q6ZSR6 202 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 EMC1Q8N766 993 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 FEM1CQ96JP0 617 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 GPR27Q9NS67 375 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 DNAJC28Q9NX36 388 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 FCF1Q9Y324 198 aaKnown RBP14.39□□□□□ -0.11
DDX11-228ENST00000545115 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
DDX11-228ENST00000545115 DOCK4Q8N1I0 1966 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 AP1G1O43747 822 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 BRINP1O60477 761 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 GIMD1P0DJR0 217 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 SDC4P31431 198 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 ACTN2P35609 894 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 GEMIN4P57678 1058 aaKnown RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 NRG1Q02297 640 aaPredicted RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 FGL2Q14314 439 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 CDO1Q16878 200 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 MANEALQ5VSG8 457 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 PARS2Q7L3T8 475 aaKnown RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 TMC6Q7Z403 805 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 PARGQ86W56 976 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 PLPP6Q8IY26 295 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 FGF11Q92914 225 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 BMFQ96LC9 184 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 APOLD1Q96LR9 279 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 UBL7Q96S82 380 aaPredicted RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 DUSP23Q9BVJ7 150 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 TM6SF2Q9BZW4 377 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 RETREG1Q9H6L5 497 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 ZDHHC6Q9H6R6 413 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 USP29Q9HBJ7 922 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 HECAQ9UBI9 543 aaPredicted RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 OR12D3Q9UGF7 316 aa14.38□□□□□ -0.11
DDX11-228ENST00000545115 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
DDX11-228ENST00000545115 MYLKQ15746 1914 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 SMG1Q96Q15 3661 aaKnown RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 SPTY2D1-AS1A0A0U1RR47 76 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 POM121BA6NF01 834 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 H3BM21 787 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 SCAMP1O15126 338 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 GFPT2O94808 682 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 CD160O95971 181 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 CYP1A1P04798 512 aaPredicted RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 GP1BAP07359 652 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 NME1P15531 152 aaKnown RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 RHOQP17081 205 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 MMP8P22894 467 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 ADRA1BP35368 520 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 ACVRL1P37023 503 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 RABIFP47224 123 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 FZD2Q14332 565 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 TBC1D25Q3MII6 688 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 ZNF542PQ5EBM4 170 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
DDX11-228ENST00000545115 NLRP14Q86W24 1093 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 FAM181AQ8N9Y4 354 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 SLC20A1Q8WUM9 679 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 RXFP2Q8WXD0 754 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 RAB7BQ96AH8 199 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 NUP62CLQ9H1M0 184 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 GANQ9H2C0 597 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 TAB2Q9NYJ8 693 aa14.37□□□□□ -0.11
DDX11-228ENST00000545115 CHMP5Q9NZZ3 219 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms