RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 E2F1Q01094 437 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 FMO1Q01740 532 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 CCDC15Q0P6D6 951 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 SYCP1Q15431 976 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 SLC45A4Q5BKX6 768 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 KIAA1614Q5VZ46 1190 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 TRNP1Q6NT89 227 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 Q6ZVU0 165 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 DCAF4L2Q8NA75 395 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 ATP11CQ8NB49 1132 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX55-212ENST00000544738 RETREG1Q9H6L5 497 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 METTL5Q9NRN9 209 aaKnown RBP16.57■□□□□ 0.24
DDX55-212ENST00000544738 MPP6Q9NZW5 540 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 VPS51Q9UID3 782 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
DDX55-212ENST00000544738 ARID1BQ8NFD5 2236 aaPredicted RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 FAM170AA1A519 330 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 ILVBLA1L0T0 632 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 LGALS16A8MUM7 142 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 TLR4O00206 839 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 EPHB6O15197 1021 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 PLRG1O43660 514 aaKnown RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 BNIP3LO60238 219 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 RTN2O75298 545 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 SRCP12931 536 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 CHRNB2P17787 502 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 SDC4P31431 198 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 NSFP46459 744 aaKnown RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 GABREP78334 506 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 ATP11AP98196 1134 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 UBXN1Q04323 297 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 SLC20A2Q08357 652 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 COLEC12Q5KU26 742 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 RETSATQ6NUM9 610 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 TFAP2DQ7Z6R9 452 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 PRPF39Q86UA1 669 aaKnown RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 FAM131BQ86XD5 332 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 LSMEM2Q8N112 164 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 EMC1Q8N766 993 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 SERAC1Q96JX3 654 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 PSMB7Q99436 277 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 FAM117AQ9C073 453 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 ZYG11BQ9C0D3 744 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 TMPRSS4Q9NRS4 437 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 PPARGC1AQ9UBK2 798 aaKnown RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 SARDHQ9UL12 918 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 DMTF1Q9Y222 760 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 TEX15Q9BXT5 2789 aa16.56■□□□□ 0.24
DDX55-212ENST00000544738 NYNRINQ9P2P1 1898 aaKnown RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 USP9XQ93008 2570 aaPredicted RBP16.56■□□□□ 0.24
DDX55-212ENST00000544738 A0A0D9SEW6 157 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 A0A1W2PR77 199 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 SNAP91O60641 907 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 MT-CO1P00395 513 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 PRNPP04156 253 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 ACP1P24666 158 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 PTPN9P43378 593 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 RECQLP46063 649 aaPredicted RBP16.55■□□□□ 0.24
DDX55-212ENST00000544738 NXPH1P58417 271 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 NFATC3Q12968 1075 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 CCDC183Q5T5S1 534 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 TMIEQ8NEW7 156 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 RXFP2Q8WXD0 754 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 C11orf70Q9BRQ4 267 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 DPH1Q9BZG8 443 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 OR12D3Q9UGF7 316 aa16.55■□□□□ 0.24
DDX55-212ENST00000544738 CXorf51AA0A1B0GTR3 108 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 C2CD4BA6NLJ0 364 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 SIGLEC6O43699 453 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 USP12O75317 370 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 CALB1P05937 261 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 CCDC172P0C7W6 258 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 KRT3P12035 628 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
DDX55-212ENST00000544738 RRM1P23921 792 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 CHRNA3P32297 505 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 ADRA1BP35368 520 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 ETFBP38117 255 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 RXRGP48443 463 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 METAP1P53582 386 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 GSCP56915 257 aaPredicted RBP16.54■□□□□ 0.24
DDX55-212ENST00000544738 DAB2P98082 770 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 NRG1Q02297 640 aaPredicted RBP16.54■□□□□ 0.24
DDX55-212ENST00000544738 CNTN1Q12860 1018 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 OVGP1Q12889 678 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 NAPEPLDQ6IQ20 393 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 TRIM69Q86WT6 500 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 MFSD2AQ8NA29 543 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 OR2A12Q8NGT7 310 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
DDX55-212ENST00000544738 PREBQ9HCU5 417 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms