RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FRG1Q14331 258 aaKnown RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 LENG1Q96BZ8 264 aaPredicted RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 MTERF3Q96E29 417 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 EBNA1BP2Q99848 306 aaKnown RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 BDH2Q9BUT1 245 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 ERVK-5Q9HDB9 667 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 NCKAP1Q9Y2A7 1128 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 CATP04040 527 aaKnown RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 GRIA4P48058 902 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 BST1Q10588 318 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PCDH18Q9HCL0 1135 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PEX1O43933 1283 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 CNOT3O75175 753 aaKnown RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 GRIK3Q13003 919 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 MSLNQ13421 630 aaPredicted RBP12.94□□□□□ -0.34
CHD4-211ENST00000544484 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 FTHL17Q9BXU8 183 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 BTRCQ9Y297 605 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 FAM220BPB1ANY3 271 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 ANXA5P08758 320 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 COX7A2P14406 83 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 GRK4P32298 578 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.344e-12■■■■□ 25.3
CHD4-211ENST00000544484 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 SERPINA13PQ6UXR4 307 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 KCNK4Q9NYG8 393 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 ADGRA3Q8IWK6 1321 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 TMEM191CA6NGB0 347 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 MDM4O15151 490 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 CLOCKO15516 846 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 DLGAP3O95886 979 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 NEK3P51956 506 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PRKAG1P54619 331 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 EID3Q8N140 333 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 TMEM132CQ8N3T6 1108 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 FIBCD1Q8N539 461 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 P2RY11Q96G91 374 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 ZFP14Q9HCL3 533 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 CNGB3Q9NQW8 809 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 VPS51Q9UID3 782 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 KLHL20Q9Y2M5 609 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 ATP6AP2A0A1C7CYW4 349 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 H3BN98 237 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 SNX3O60493 162 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ATP6AP2O75787 350 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 IL1BP01584 269 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 KRT20P35900 424 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 HNF4AP41235 474 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 THOP1P52888 689 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 DUSP12Q9UNI6 340 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 ITGA2BP08514 1039 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PSEN1P49768 467 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ITGA7Q13683 1181 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 SPDYCQ5MJ68 293 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ATAD3BQ5T9A4 648 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 RAET1GQ6H3X3 334 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PRMT9Q6P2P2 845 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ATAD1Q8NBU5 361 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 MECRQ9BV79 373 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 A0A1W2PPM1 405 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 LBPP18428 481 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FLT3P36888 993 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FAM45BPQ6NSW5 357 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FBXO30Q8TB52 745 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ITFG1Q8TB96 612 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FAM45AQ8TCE6 357 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 MYOCQ99972 504 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 NDEL1Q9GZM8 345 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 RIBC2Q9H4K1 309 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 CAB39LQ9H9S4 337 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 IL1RAPL1Q9NZN1 696 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 MORF4L1Q9UBU8 362 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PTGES3LE9PB15 166 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FAM20BO75063 409 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 PAGE1O75459 146 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 FAM58BPP0C7Q3 252 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 NOS3P29474 1203 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 NCF4Q15080 339 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms