RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 TM7SF3Q9NS93 570 aa14.18□□□□□ -0.14
VAMP1-208ENST00000544432 AP4E1Q9UPM8 1137 aa14.18□□□□□ -0.14
VAMP1-208ENST00000544432 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
VAMP1-208ENST00000544432 CEP295Q9C0D2 2601 aa14.18□□□□□ -0.14
VAMP1-208ENST00000544432 NYNRINQ9P2P1 1898 aaKnown RBP14.18□□□□□ -0.14
VAMP1-208ENST00000544432 CHD8Q9HCK8 2581 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 RASA4BC9J798 803 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 KPNA3O00505 521 aaPredicted RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 RASA4O43374 803 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SH3BP5O60239 455 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 RNGTTO60942 597 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 LEFTY1O75610 366 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 ITGB7P26010 798 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 MIPP30301 263 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 HCAR3P49019 387 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 CCNHP51946 323 aaPredicted RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 C21orf59P57076 290 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SNRPD1P62314 119 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 PPP2CBP62714 309 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 PPP2CAP67775 309 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 OVGP1Q12889 678 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SERINC3Q13530 473 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SUZ12Q15022 739 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 POM121L1PQ3SYA9 428 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SLC45A4Q5BKX6 768 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 KCNT1Q5JUK3 1230 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 NAPEPLDQ6IQ20 393 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 CYP4V2Q6ZWL3 525 aaPredicted RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 ADAT2Q7Z6V5 191 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 CPLX3Q8WVH0 158 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SERAC1Q96JX3 654 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 SLC6A18Q96N87 628 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 IL21RQ9HBE5 538 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 HECAQ9UBI9 543 aaPredicted RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 ANGPTL2Q9UKU9 493 aa14.17□□□□□ -0.14
VAMP1-208ENST00000544432 FNDC3AQ9Y2H6 1198 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 FCF1Q9Y324 198 aaKnown RBP14.17□□□□□ -0.14
VAMP1-208ENST00000544432 AP1G1O43747 822 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 PCDHGA12O60330 932 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 CBFA2T3O75081 653 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 LRCH4O75427 683 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 POP4O95707 220 aaKnown RBP14.16□□□□□ -0.14
VAMP1-208ENST00000544432 WNT1P04628 370 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 DNA2P51530 1060 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 NDST2P52849 883 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 TPI1P60174 286 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 SETMARQ53H47 684 aaPredicted RBP14.16□□□□□ -0.14
VAMP1-208ENST00000544432 BOLA3Q53S33 107 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 GLRX5Q86SX6 157 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 IQCHQ86VS3 1027 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 ZSCAN30Q86W11 494 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 NAXDQ8IW45 347 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 MFSD2AQ8NA29 543 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 OR2AP1Q8NGE2 309 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 HMCESQ96FZ2 354 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 PEBP4Q96S96 227 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.16□□□□□ -0.14
VAMP1-208ENST00000544432 SNRNP25Q9BV90 132 aaKnown RBP14.16□□□□□ -0.14
VAMP1-208ENST00000544432 TRIM7Q9C029 511 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 TSPY26PQ9H489 355 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 LRRC19Q9H756 370 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 ERVMER34-1Q9H9K5 563 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 AASDHPPTQ9NRN7 309 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 MYO1AQ9UBC5 1043 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 WASF3Q9UPY6 502 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 ACTL7AQ9Y615 435 aa14.16□□□□□ -0.14
VAMP1-208ENST00000544432 A0A087X0T9 212 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 PRAMEF26H0Y7S4 382 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 TLR4O00206 839 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 RNF103O00237 685 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 EEF2KO00418 725 aaKnown RBP14.15□□□□□ -0.14
VAMP1-208ENST00000544432 WNT9AO14904 365 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 FLRT2O43155 660 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 BUB1O43683 1085 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 MAGEC1O60732 1142 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 TRIM16O95361 564 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 CYP1A2P05177 515 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 FAM228BP0C875 321 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 CASP14P31944 242 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 CCT8P50990 548 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 NEK3P51956 506 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 TRIM14Q14142 442 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 PIGHQ14442 188 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-208ENST00000544432 TRIP6Q15654 476 aaKnown RBP14.15□□□□□ -0.14
VAMP1-208ENST00000544432 CA9Q16790 459 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 MYLK3Q32MK0 819 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 SPECC1LQ69YQ0 1117 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 ALKBH5Q6P6C2 394 aaKnown RBP14.15□□□□□ -0.14
VAMP1-208ENST00000544432 HORMAD1Q86X24 394 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 NIPA2Q8N8Q9 360 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 RAB7BQ96AH8 199 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 VOPP1Q96AW1 172 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 OSBPL1AQ9BXW6 950 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 TM6SF2Q9BZW4 377 aa14.15□□□□□ -0.14
VAMP1-208ENST00000544432 KLC2Q9H0B6 622 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms