RNA–Protein interactions for RNA: ENST00000544392.5

CACUL1-207, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-207ENST00000544392 FAM13CQ8NE31 585 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 PCDH19Q8TAB3 1148 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 GABPB2Q8TAK5 448 aaPredicted RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 SHKBP1Q8TBC3 707 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 FBXO25Q8TCJ0 367 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 MICAL1Q8TDZ2 1067 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 HTR3CQ8WXA8 447 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 HERVK_113Q902F9 699 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 DPF3Q92784 378 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 GATA6Q92908 595 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 BADQ92934 168 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 PPP2R3CQ969Q6 453 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 EXOC4Q96A65 974 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 AZIN2Q96A70 460 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 PIWIL1Q96J94 861 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 PEBP4Q96S96 227 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 TMEM209Q96SK2 561 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 TMEM121Q9BTD3 319 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 NAT9Q9BTE0 207 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 TTLL2Q9BWV7 592 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 SIK2Q9H0K1 926 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 XAB2Q9HCS7 855 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 ARHGEF38Q9NXL2 777 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 CWC15Q9P013 229 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 HPCAL4Q9UM19 191 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 PPT2Q9UMR5 302 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 MAGED2Q9UNF1 606 aaPredicted RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 ZNF510Q9Y2H8 683 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 R3HDM2Q9Y2K5 976 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
CACUL1-207ENST00000544392 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
CACUL1-207ENST00000544392 FAM170BA6NMN3 283 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 HMGB1P1B2RPK0 211 aaPredicted RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 GSC2O15499 205 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 FYNP06241 537 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 CD48P09326 243 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 CTSAP10619 480 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 IL4RP24394 825 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 KLRC2P26717 231 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 HSD17B3P37058 310 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ETFBP38117 255 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 VPS41P49754 854 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MLLT6P55198 1093 aaPredicted RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MRPS25P82663 173 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 STAT4Q14765 748 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 TRIP13Q15645 432 aaPredicted RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 PARP6Q2NL67 630 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 TMEM201Q5SNT2 666 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 LGSNQ5TDP6 509 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 SNX30Q5VWJ9 437 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 SLC6A19Q695T7 634 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 TRNP1Q6NT89 227 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 GPRIN1Q7Z2K8 1008 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 TMC3Q7Z5M5 1100 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 DDX42Q86XP3 938 aaKnown RBP eCLIP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MCATQ8IVS2 390 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MRPL41Q8IXM3 137 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 C7orf61Q8IZ16 206 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 PYROXD1Q8WU10 500 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MRPS31Q92665 395 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 LRRC39Q96DD0 335 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 RTP4Q96DX8 246 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 QKIQ96PU8 341 aaKnown RBP eCLIP9.31□□□□□ -0.923e-6■■■□□ 17.2
CACUL1-207ENST00000544392 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 FERD3LQ96RJ6 166 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 RBM15Q96T37 977 aaKnown RBP eCLIP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 RHOBTB2Q9BYZ6 727 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ZYG11BQ9C0D3 744 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 CENPHQ9H3R5 247 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 PLEKHA4Q9H4M7 779 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 RXFP1Q9HBX9 757 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ENTPD7Q9NQZ7 604 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ARHGEF4Q9NR80 690 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ZDHHC18Q9NUE0 388 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 GPATCH2LQ9NWQ4 482 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 ZNF446Q9NWS9 450 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 GMIPQ9P107 970 aa9.31□□□□□ -0.92
CACUL1-207ENST00000544392 PPARGC1AQ9UBK2 798 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 LSM7Q9UK45 103 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 AAR2Q9Y312 384 aaKnown RBP9.31□□□□□ -0.92
CACUL1-207ENST00000544392 TANC1Q9C0D5 1861 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 A0A087WUV0 522 aaPredicted RBP9.3□□□□□ -0.92
CACUL1-207ENST00000544392 SLC12A8A0AV02 714 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 MAGEB16A2A368 324 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 WDR27A2RRH5 827 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 ARHGAP42A6NI28 874 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 CHURC1-FNTBB4DL54 471 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 F5H5T6 163 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 F8W810 466 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 B4GALT3O60512 393 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 TLR5O60602 858 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 LEFTY1O75610 366 aa9.3□□□□□ -0.92
CACUL1-207ENST00000544392 ATE1O95260 518 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms