RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 AGBL3Q8NEM8 1001 aa24.03■■□□□ 1.44
SHD-201ENST00000543264 RNF139Q8WU17 664 aa24.03■■□□□ 1.44
SHD-201ENST00000543264 MRPL40Q9NQ50 206 aaKnown RBP24.03■■□□□ 1.44
SHD-201ENST00000543264 GTSE1Q9NYZ3 720 aa24.03■■□□□ 1.44
SHD-201ENST00000543264 CCDC167Q9P0B6 97 aa24.03■■□□□ 1.44
SHD-201ENST00000543264 IPO11Q9UI26 975 aaKnown RBP24.03■■□□□ 1.44
SHD-201ENST00000543264 RLFQ13129 1914 aa24.03■■□□□ 1.44
SHD-201ENST00000543264 PSMD12O00232 456 aaPredicted RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 HCRTO43612 131 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 SEC24DO94855 1032 aaPredicted RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 LRRC8EQ6NSJ5 796 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 STYXQ8WUJ0 223 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 NDRG1Q92597 394 aaKnown RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.02■■□□□ 1.44
SHD-201ENST00000543264 XPR1Q9UBH6 696 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PAIP2BQ9ULR5 123 aaKnown RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 PSME4Q14997 1843 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 EVPLQ92817 2033 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 A0A087WXM4 84 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 ZNF839A8K0R7 811 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 AKAP10O43572 662 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 AP2A1O95782 977 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 GNAO1P09471 354 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PTPRAP18433 802 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PSMD7P51665 324 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PRKAA2P54646 552 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PRKCQQ04759 706 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 STX5Q13190 355 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 ZNF460Q14592 562 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 ZBED5Q49AG3 693 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 AGKQ53H12 422 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 NBPF12Q5TAG4 269 aaPredicted RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 TTC33Q6PID6 262 aaPredicted RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 METTL7BQ6UX53 244 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 FAM110BQ8TC76 370 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 AFG1LQ8WV93 481 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 SGF29Q96ES7 293 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 EFHD1Q9BUP0 239 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 PICK1Q9NRD5 415 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 CACNA2D2Q9NY47 1150 aa24.02■■□□□ 1.44
SHD-201ENST00000543264 ZNF638Q14966 1978 aaKnown RBP24.02■■□□□ 1.44
SHD-201ENST00000543264 SAC3D1A6NKF1 404 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 HSPA1AP0DMV8 641 aaKnown RBP24.01■■□□□ 1.43
SHD-201ENST00000543264 HSPA1BP0DMV9 641 aaKnown RBP24.01■■□□□ 1.43
SHD-201ENST00000543264 CCR3P51677 355 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 SLC41A1Q8IVJ1 513 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TTC39CQ8N584 583 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 THAP11Q96EK4 314 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 ANKRD6Q9Y2G4 727 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 PHIPQ8WWQ0 1821 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TCRBV3S1A0A5B6 114 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 FBP2O00757 339 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TRIM24O15164 1050 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 HNRNPLP14866 589 aaKnown RBP eCLIP24.01■■□□□ 1.43
SHD-201ENST00000543264 NMBRP28336 390 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TNFAIP2Q03169 654 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 LRP8Q14114 963 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 REP15Q6BDI9 236 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 OR6B3Q8NGW1 331 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TFAP2CQ92754 450 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 PBXIP1Q96AQ6 731 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 DPEP3Q9H4B8 488 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 COL4A5P29400 1685 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 LCTP09848 1927 aa24.01■■□□□ 1.43
SHD-201ENST00000543264 TRPC5OSA6NMA1 111 aa24■■□□□ 1.43
SHD-201ENST00000543264 SLC35E2BP0CK96 405 aa24■■□□□ 1.43
SHD-201ENST00000543264 SULT1E1P49888 294 aa24■■□□□ 1.43
SHD-201ENST00000543264 AMHR2Q16671 573 aa24■■□□□ 1.43
SHD-201ENST00000543264 HMGCLL1Q8TB92 370 aa24■■□□□ 1.43
SHD-201ENST00000543264 FAM149B1Q96BN6 582 aa24■■□□□ 1.43
SHD-201ENST00000543264 KIF12Q96FN5 646 aa24■■□□□ 1.43
SHD-201ENST00000543264 GPR22Q99680 433 aa24■■□□□ 1.43
SHD-201ENST00000543264 GMPR2Q9P2T1 348 aaKnown RBP24■■□□□ 1.43
SHD-201ENST00000543264 GIPC1O14908 333 aa24■■□□□ 1.43
SHD-201ENST00000543264 PTPN3P26045 913 aa24■■□□□ 1.43
SHD-201ENST00000543264 PSMD8P48556 350 aa24■■□□□ 1.43
SHD-201ENST00000543264 IGBP1P78318 339 aa24■■□□□ 1.43
SHD-201ENST00000543264 PITX1P78337 314 aaPredicted RBP24■■□□□ 1.43
SHD-201ENST00000543264 SLC12A1Q13621 1099 aa24■■□□□ 1.43
SHD-201ENST00000543264 Q3C1V9 767 aa24■■□□□ 1.43
SHD-201ENST00000543264 PPP4R4Q6NUP7 873 aa24■■□□□ 1.43
SHD-201ENST00000543264 CATSPERGQ6ZRH7 1159 aa24■■□□□ 1.43
SHD-201ENST00000543264 FASTKD5Q7L8L6 764 aaKnown RBP24■■□□□ 1.43
SHD-201ENST00000543264 ZC3HC1Q86WB0 502 aaKnown RBP24■■□□□ 1.43
SHD-201ENST00000543264 CENPLQ8N0S6 344 aaPredicted RBP24■■□□□ 1.43
SHD-201ENST00000543264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24■■□□□ 1.43
SHD-201ENST00000543264 TOP1MTQ969P6 601 aa24■■□□□ 1.43
SHD-201ENST00000543264 NXNL1Q96CM4 212 aa24■■□□□ 1.43
SHD-201ENST00000543264 AS3MTQ9HBK9 375 aa24■■□□□ 1.43
SHD-201ENST00000543264 SPAG4Q9NPE6 437 aa24■■□□□ 1.43
SHD-201ENST00000543264 CASS4Q9NQ75 786 aa24■■□□□ 1.43
SHD-201ENST00000543264 TBC1D23Q9NUY8 699 aa24■■□□□ 1.43
SHD-201ENST00000543264 PRMT7Q9NVM4 692 aaPredicted RBP24■■□□□ 1.43
SHD-201ENST00000543264 SFMBT1Q9UHJ3 866 aa24■■□□□ 1.43
SHD-201ENST00000543264 PPEF2O14830 753 aa23.99■■□□□ 1.43
SHD-201ENST00000543264 ATE1O95260 518 aa23.99■■□□□ 1.43
SHD-201ENST00000543264 ETFBP38117 255 aa23.99■■□□□ 1.43
SHD-201ENST00000543264 TRAP1Q12931 704 aaKnown RBP23.99■■□□□ 1.43
SHD-201ENST00000543264 FASTKQ14296 549 aaKnown RBP23.99■■□□□ 1.43
SHD-201ENST00000543264 KCTD21Q4G0X4 260 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms